Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.93■■□□□ 1.74
CCNA1P78396 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCNA1P78396 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC25.93■■□□□ 1.74
CCNA1P78396 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.93■■□□□ 1.74
CCNA1P78396 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCNA1P78396 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCNA1P78396 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
CCNA1P78396 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.93■■□□□ 1.74
CCNA1P78396 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCNA1P78396 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CCNA1P78396 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.93■■□□□ 1.74
CCNA1P78396 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.93■■□□□ 1.74
CCNA1P78396 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
CCNA1P78396 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCNA1P78396 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.92■■□□□ 1.74
CCNA1P78396 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.92■■□□□ 1.74
CCNA1P78396 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.92■■□□□ 1.74
CCNA1P78396 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.92■■□□□ 1.74
CCNA1P78396 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.92■■□□□ 1.74
CCNA1P78396 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
CCNA1P78396 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CCNA1P78396 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCNA1P78396 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCNA1P78396 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.91■■□□□ 1.74
CCNA1P78396 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
CCNA1P78396 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.91■■□□□ 1.74
CCNA1P78396 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CCNA1P78396 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.91■■□□□ 1.74
CCNA1P78396 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.9■■□□□ 1.74
CCNA1P78396 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CCNA1P78396 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC25.9■■□□□ 1.74
CCNA1P78396 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.89■■□□□ 1.74
CCNA1P78396 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCNA1P78396 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCNA1P78396 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CCNA1P78396 IGHV3-19-201ENST00000521488 291 ntBASIC25.89■■□□□ 1.74
CCNA1P78396 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.89■■□□□ 1.74
CCNA1P78396 AC022517.1-201ENST00000592429 346 ntBASIC25.89■■□□□ 1.74
CCNA1P78396 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.74
CCNA1P78396 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCNA1P78396 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.88■■□□□ 1.73
CCNA1P78396 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.88■■□□□ 1.73
CCNA1P78396 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCNA1P78396 AC027612.3-201ENST00000413684 1047 ntBASIC25.88■■□□□ 1.73
CCNA1P78396 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
CCNA1P78396 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
CCNA1P78396 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.88■■□□□ 1.73
CCNA1P78396 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.87■■□□□ 1.73
CCNA1P78396 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.87■■□□□ 1.73
CCNA1P78396 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
CCNA1P78396 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
CCNA1P78396 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.87■■□□□ 1.73
CCNA1P78396 KRT18P5-201ENST00000436075 1291 ntBASIC25.87■■□□□ 1.73
CCNA1P78396 AC123595.1-201ENST00000440769 1046 ntBASIC25.87■■□□□ 1.73
CCNA1P78396 AL137784.2-201ENST00000607332 1000 ntBASIC25.87■■□□□ 1.73
CCNA1P78396 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.87■■□□□ 1.73
CCNA1P78396 EI24-204ENST00000527235 1625 ntTSL 5 BASIC25.87■■□□□ 1.73
CCNA1P78396 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.87■■□□□ 1.73
CCNA1P78396 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CCNA1P78396 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
CCNA1P78396 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
CCNA1P78396 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCNA1P78396 MIR572-201ENST00000384983 95 ntBASIC25.86■■□□□ 1.73
CCNA1P78396 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.86■■□□□ 1.73
CCNA1P78396 AL031602.1-201ENST00000633169 911 ntBASIC25.86■■□□□ 1.73
CCNA1P78396 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.86■■□□□ 1.73
CCNA1P78396 RARRES2P11-201ENST00000635158 484 ntBASIC25.86■■□□□ 1.73
CCNA1P78396 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CCNA1P78396 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.86■■□□□ 1.73
CCNA1P78396 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCNA1P78396 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCNA1P78396 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.85■■□□□ 1.73
CCNA1P78396 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC25.85■■□□□ 1.73
CCNA1P78396 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC25.85■■□□□ 1.73
CCNA1P78396 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.85■■□□□ 1.73
CCNA1P78396 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.85■■□□□ 1.73
CCNA1P78396 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
CCNA1P78396 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCNA1P78396 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
CCNA1P78396 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
CCNA1P78396 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.84■■□□□ 1.73
CCNA1P78396 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCNA1P78396 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CCNA1P78396 DUX4L2-201ENST00000561772 1275 ntBASIC25.84■■□□□ 1.73
CCNA1P78396 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.84■■□□□ 1.73
CCNA1P78396 AL354811.1-201ENST00000610286 706 ntBASIC25.84■■□□□ 1.73
CCNA1P78396 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CCNA1P78396 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.84■■□□□ 1.73
CCNA1P78396 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CCNA1P78396 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.84■■□□□ 1.73
CCNA1P78396 DUX4L6-201ENST00000626483 1275 ntBASIC25.84■■□□□ 1.73
CCNA1P78396 DUX4L1-201ENST00000627662 1275 ntBASIC25.84■■□□□ 1.73
CCNA1P78396 DUX4L8-201ENST00000629013 1275 ntBASIC25.84■■□□□ 1.73
CCNA1P78396 DUX4L3-201ENST00000630187 1275 ntBASIC25.84■■□□□ 1.73
CCNA1P78396 DUX4L7-201ENST00000630678 1275 ntBASIC25.84■■□□□ 1.73
CCNA1P78396 DUX4L5-201ENST00000630834 1275 ntBASIC25.84■■□□□ 1.73
CCNA1P78396 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CCNA1P78396 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.84■■□□□ 1.73
CCNA1P78396 AC133637.1-201ENST00000624115 1537 ntBASIC25.83■■□□□ 1.73
CCNA1P78396 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms