Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SPCS3P61009 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.27■□□□□ 0.51
SPCS3P61009 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SPCS3P61009 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SPCS3P61009 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPCS3P61009 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SPCS3P61009 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SPCS3P61009 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SPCS3P61009 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPCS3P61009 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPCS3P61009 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPCS3P61009 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.26■□□□□ 0.51
SPCS3P61009 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.26■□□□□ 0.51
SPCS3P61009 MIR6765-201ENST00000614092 87 ntBASIC18.26■□□□□ 0.51
SPCS3P61009 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.26■□□□□ 0.51
SPCS3P61009 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.26■□□□□ 0.51
SPCS3P61009 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.26■□□□□ 0.51
SPCS3P61009 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPCS3P61009 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SPCS3P61009 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SPCS3P61009 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPCS3P61009 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SPCS3P61009 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SPCS3P61009 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPCS3P61009 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPCS3P61009 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPCS3P61009 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPCS3P61009 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.25■□□□□ 0.51
SPCS3P61009 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPCS3P61009 SPCS2P3-201ENST00000500401 656 ntBASIC18.25■□□□□ 0.51
SPCS3P61009 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.25■□□□□ 0.51
SPCS3P61009 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPCS3P61009 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.25■□□□□ 0.51
SPCS3P61009 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPCS3P61009 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPCS3P61009 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPCS3P61009 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.25■□□□□ 0.51
SPCS3P61009 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SPCS3P61009 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPCS3P61009 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SPCS3P61009 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.24■□□□□ 0.51
SPCS3P61009 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.24■□□□□ 0.51
SPCS3P61009 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.24■□□□□ 0.51
SPCS3P61009 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPCS3P61009 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPCS3P61009 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPCS3P61009 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPCS3P61009 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.24■□□□□ 0.51
SPCS3P61009 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPCS3P61009 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SPCS3P61009 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SPCS3P61009 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPCS3P61009 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SPCS3P61009 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SPCS3P61009 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.23■□□□□ 0.51
SPCS3P61009 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPCS3P61009 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPCS3P61009 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SPCS3P61009 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SPCS3P61009 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.23■□□□□ 0.51
SPCS3P61009 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
SPCS3P61009 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.23■□□□□ 0.51
SPCS3P61009 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.23■□□□□ 0.51
SPCS3P61009 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SPCS3P61009 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SPCS3P61009 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SPCS3P61009 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPCS3P61009 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SPCS3P61009 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.22■□□□□ 0.51
SPCS3P61009 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SPCS3P61009 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SPCS3P61009 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.22■□□□□ 0.51
SPCS3P61009 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SPCS3P61009 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
SPCS3P61009 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPCS3P61009 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SPCS3P61009 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPCS3P61009 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SPCS3P61009 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SPCS3P61009 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.21■□□□□ 0.51
SPCS3P61009 AC011551.1-201ENST00000614101 683 ntBASIC18.21■□□□□ 0.51
SPCS3P61009 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPCS3P61009 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPCS3P61009 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPCS3P61009 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPCS3P61009 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.21■□□□□ 0.51
SPCS3P61009 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SPCS3P61009 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPCS3P61009 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SPCS3P61009 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPCS3P61009 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPCS3P61009 C1orf229-201ENST00000623686 2258 ntBASIC18.2■□□□□ 0.5
SPCS3P61009 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPCS3P61009 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.2■□□□□ 0.5
SPCS3P61009 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.2■□□□□ 0.5
SPCS3P61009 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPCS3P61009 LONRF2P2-201ENST00000439212 571 ntBASIC18.2■□□□□ 0.5
SPCS3P61009 DUX4L9-201ENST00000449051 1259 ntBASIC18.2■□□□□ 0.5
SPCS3P61009 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SPCS3P61009 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms