Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.81■■□□□ 1.08
CLDN6P56747 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.81■■□□□ 1.08
CLDN6P56747 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.81■■□□□ 1.08
CLDN6P56747 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CLDN6P56747 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.81■■□□□ 1.08
CLDN6P56747 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.81■■□□□ 1.08
CLDN6P56747 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.8■■□□□ 1.08
CLDN6P56747 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.8■■□□□ 1.08
CLDN6P56747 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.8■■□□□ 1.08
CLDN6P56747 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.8■■□□□ 1.08
CLDN6P56747 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.8■■□□□ 1.08
CLDN6P56747 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN6P56747 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CLDN6P56747 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN6P56747 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN6P56747 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN6P56747 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CLDN6P56747 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CLDN6P56747 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN6P56747 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN6P56747 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLDN6P56747 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN6P56747 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CLDN6P56747 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.79■■□□□ 1.08
CLDN6P56747 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN6P56747 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN6P56747 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN6P56747 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.79■■□□□ 1.08
CLDN6P56747 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CLDN6P56747 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLDN6P56747 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.79■■□□□ 1.08
CLDN6P56747 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
CLDN6P56747 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN6P56747 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN6P56747 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.78■■□□□ 1.08
CLDN6P56747 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.78■■□□□ 1.08
CLDN6P56747 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.78■■□□□ 1.08
CLDN6P56747 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.78■■□□□ 1.08
CLDN6P56747 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN6P56747 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.78■■□□□ 1.08
CLDN6P56747 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLDN6P56747 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
CLDN6P56747 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN6P56747 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.77■■□□□ 1.08
CLDN6P56747 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN6P56747 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN6P56747 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.77■■□□□ 1.08
CLDN6P56747 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN6P56747 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLDN6P56747 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLDN6P56747 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.76■■□□□ 1.07
CLDN6P56747 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.75■■□□□ 1.07
CLDN6P56747 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.75■■□□□ 1.07
CLDN6P56747 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN6P56747 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CLDN6P56747 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.75■■□□□ 1.07
CLDN6P56747 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.75■■□□□ 1.07
CLDN6P56747 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.75■■□□□ 1.07
CLDN6P56747 MIR6089-201ENST00000616698 64 ntBASIC21.75■■□□□ 1.07
CLDN6P56747 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN6P56747 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN6P56747 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN6P56747 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.75■■□□□ 1.07
CLDN6P56747 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
CLDN6P56747 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLDN6P56747 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
CLDN6P56747 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.74■■□□□ 1.07
CLDN6P56747 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN6P56747 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.74■■□□□ 1.07
CLDN6P56747 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CLDN6P56747 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.74■■□□□ 1.07
CLDN6P56747 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN6P56747 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN6P56747 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLDN6P56747 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.73■■□□□ 1.07
CLDN6P56747 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN6P56747 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
CLDN6P56747 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CLDN6P56747 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN6P56747 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.73■■□□□ 1.07
CLDN6P56747 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN6P56747 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.73■■□□□ 1.07
CLDN6P56747 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.73■■□□□ 1.07
CLDN6P56747 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN6P56747 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CLDN6P56747 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN6P56747 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.73■■□□□ 1.07
CLDN6P56747 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLDN6P56747 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.73■■□□□ 1.07
CLDN6P56747 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.73■■□□□ 1.07
CLDN6P56747 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN6P56747 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN6P56747 ID1-201ENST00000376105 1233 ntBASIC21.72■■□□□ 1.07
CLDN6P56747 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN6P56747 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
CLDN6P56747 CCDC92B-201ENST00000575506 885 ntBASIC21.72■■□□□ 1.07
CLDN6P56747 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CLDN6P56747 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CLDN6P56747 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.72■■□□□ 1.07
CLDN6P56747 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms