Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSR4P51571 AC133561.4-201ENST00000566112 224 ntBASIC20.78■□□□□ 0.92
SSR4P51571 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.78■□□□□ 0.92
SSR4P51571 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.78■□□□□ 0.92
SSR4P51571 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSR4P51571 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSR4P51571 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SSR4P51571 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR4P51571 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR4P51571 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.77■□□□□ 0.92
SSR4P51571 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SSR4P51571 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SSR4P51571 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSR4P51571 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SSR4P51571 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SSR4P51571 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSR4P51571 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SSR4P51571 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SSR4P51571 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.76■□□□□ 0.91
SSR4P51571 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.76■□□□□ 0.91
SSR4P51571 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.76■□□□□ 0.91
SSR4P51571 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSR4P51571 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSR4P51571 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.75■□□□□ 0.91
SSR4P51571 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR4P51571 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR4P51571 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.75■□□□□ 0.91
SSR4P51571 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SSR4P51571 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR4P51571 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SSR4P51571 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR4P51571 AC024257.2-201ENST00000549699 147 ntBASIC20.75■□□□□ 0.91
SSR4P51571 AC005837.3-201ENST00000612163 286 ntBASIC20.75■□□□□ 0.91
SSR4P51571 AC009086.3-201ENST00000623486 1008 ntBASIC20.75■□□□□ 0.91
SSR4P51571 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSR4P51571 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSR4P51571 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSR4P51571 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SSR4P51571 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SSR4P51571 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSR4P51571 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSR4P51571 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.74■□□□□ 0.91
SSR4P51571 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.74■□□□□ 0.91
SSR4P51571 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.74■□□□□ 0.91
SSR4P51571 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SSR4P51571 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSR4P51571 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSR4P51571 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SSR4P51571 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR4P51571 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SSR4P51571 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSR4P51571 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR4P51571 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR4P51571 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSR4P51571 SERBP1P1-201ENST00000396021 1160 ntBASIC20.73■□□□□ 0.91
SSR4P51571 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
SSR4P51571 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR4P51571 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSR4P51571 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR4P51571 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR4P51571 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SSR4P51571 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
SSR4P51571 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SSR4P51571 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSR4P51571 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SSR4P51571 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSR4P51571 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.72■□□□□ 0.91
SSR4P51571 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.72■□□□□ 0.91
SSR4P51571 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.72■□□□□ 0.91
SSR4P51571 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.72■□□□□ 0.91
SSR4P51571 AL138724.1-201ENST00000606771 1088 ntBASIC20.72■□□□□ 0.91
SSR4P51571 AC004812.2-201ENST00000611079 2094 ntBASIC20.72■□□□□ 0.91
SSR4P51571 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSR4P51571 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SSR4P51571 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSR4P51571 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSR4P51571 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.71■□□□□ 0.91
SSR4P51571 AC006455.2-201ENST00000429931 906 ntBASIC20.71■□□□□ 0.91
SSR4P51571 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSR4P51571 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.71■□□□□ 0.91
SSR4P51571 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSR4P51571 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
SSR4P51571 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.7■□□□□ 0.9
SSR4P51571 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSR4P51571 EDA-201ENST00000338901 1233 ntBASIC20.7■□□□□ 0.9
SSR4P51571 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.7■□□□□ 0.9
SSR4P51571 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.7■□□□□ 0.9
SSR4P51571 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSR4P51571 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSR4P51571 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSR4P51571 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSR4P51571 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSR4P51571 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SSR4P51571 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SSR4P51571 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSR4P51571 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.69■□□□□ 0.9
SSR4P51571 AC011298.3-201ENST00000615796 283 ntBASIC20.69■□□□□ 0.9
SSR4P51571 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.69■□□□□ 0.9
SSR4P51571 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SSR4P51571 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms