Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.63■■□□□ 1.05
CDK9P50750 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.63■■□□□ 1.05
CDK9P50750 AC120024.1-201ENST00000562672 995 ntBASIC21.63■■□□□ 1.05
CDK9P50750 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDK9P50750 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDK9P50750 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.63■■□□□ 1.05
CDK9P50750 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.63■■□□□ 1.05
CDK9P50750 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDK9P50750 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDK9P50750 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CDK9P50750 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDK9P50750 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
CDK9P50750 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDK9P50750 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CDK9P50750 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CDK9P50750 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDK9P50750 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDK9P50750 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDK9P50750 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDK9P50750 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.61■■□□□ 1.05
CDK9P50750 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.61■■□□□ 1.05
CDK9P50750 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CDK9P50750 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDK9P50750 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDK9P50750 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDK9P50750 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CDK9P50750 AL451085.2-201ENST00000605085 799 ntBASIC21.61■■□□□ 1.05
CDK9P50750 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDK9P50750 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDK9P50750 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDK9P50750 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CDK9P50750 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.6■■□□□ 1.05
CDK9P50750 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDK9P50750 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK9P50750 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.6■■□□□ 1.05
CDK9P50750 AC103724.3-201ENST00000564481 992 ntBASIC21.6■■□□□ 1.05
CDK9P50750 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK9P50750 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK9P50750 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK9P50750 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK9P50750 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.6■■□□□ 1.05
CDK9P50750 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDK9P50750 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDK9P50750 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDK9P50750 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
CDK9P50750 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.59■■□□□ 1.05
CDK9P50750 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
CDK9P50750 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDK9P50750 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDK9P50750 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDK9P50750 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDK9P50750 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDK9P50750 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDK9P50750 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CDK9P50750 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CDK9P50750 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
CDK9P50750 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CDK9P50750 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDK9P50750 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CDK9P50750 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CDK9P50750 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CDK9P50750 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.58■■□□□ 1.05
CDK9P50750 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
CDK9P50750 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.58■■□□□ 1.05
CDK9P50750 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.58■■□□□ 1.04
CDK9P50750 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CDK9P50750 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
CDK9P50750 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDK9P50750 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDK9P50750 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDK9P50750 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDK9P50750 AC131274.2-201ENST00000580697 1507 ntBASIC21.57■■□□□ 1.04
CDK9P50750 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDK9P50750 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.57■■□□□ 1.04
CDK9P50750 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.57■■□□□ 1.04
CDK9P50750 AC233723.2-201ENST00000623798 2106 ntBASIC21.57■■□□□ 1.04
CDK9P50750 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.57■■□□□ 1.04
CDK9P50750 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDK9P50750 C1orf229-201ENST00000623686 2258 ntBASIC21.57■■□□□ 1.04
CDK9P50750 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDK9P50750 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDK9P50750 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.56■■□□□ 1.04
CDK9P50750 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDK9P50750 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDK9P50750 AL022069.1-201ENST00000568025 1636 ntBASIC21.56■■□□□ 1.04
CDK9P50750 KRT18P24-201ENST00000344739 1156 ntBASIC21.56■■□□□ 1.04
CDK9P50750 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDK9P50750 MIR4281-201ENST00000580852 62 ntBASIC21.56■■□□□ 1.04
CDK9P50750 THA1P-201ENST00000590384 1145 ntBASIC21.56■■□□□ 1.04
CDK9P50750 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.56■■□□□ 1.04
CDK9P50750 AL031848.2-201ENST00000607670 837 ntBASIC21.56■■□□□ 1.04
CDK9P50750 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDK9P50750 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDK9P50750 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDK9P50750 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.55■■□□□ 1.04
CDK9P50750 AL161729.1-201ENST00000604104 1402 ntBASIC21.55■■□□□ 1.04
CDK9P50750 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
CDK9P50750 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.55■■□□□ 1.04
CDK9P50750 AL035685.1-201ENST00000636663 812 ntBASIC21.55■■□□□ 1.04
CDK9P50750 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms