Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LHX2P50458 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.28■□□□□ 0.84
LHX2P50458 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LHX2P50458 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LHX2P50458 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.27■□□□□ 0.84
LHX2P50458 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LHX2P50458 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
LHX2P50458 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.27■□□□□ 0.84
LHX2P50458 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.27■□□□□ 0.84
LHX2P50458 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LHX2P50458 PBX2P1-201ENST00000493219 1291 ntBASIC20.27■□□□□ 0.84
LHX2P50458 AL136162.1-201ENST00000607711 1078 ntBASIC20.27■□□□□ 0.84
LHX2P50458 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.27■□□□□ 0.84
LHX2P50458 AC019069.1-201ENST00000610008 1333 ntBASIC20.27■□□□□ 0.83
LHX2P50458 SYT6-210ENST00000641643 1587 ntBASIC20.26■□□□□ 0.83
LHX2P50458 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LHX2P50458 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LHX2P50458 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX2P50458 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LHX2P50458 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
LHX2P50458 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LHX2P50458 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LHX2P50458 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.26■□□□□ 0.83
LHX2P50458 AC133561.4-201ENST00000566112 224 ntBASIC20.26■□□□□ 0.83
LHX2P50458 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
LHX2P50458 AC135279.3-201ENST00000610945 1311 ntBASIC20.26■□□□□ 0.83
LHX2P50458 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX2P50458 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.25■□□□□ 0.83
LHX2P50458 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LHX2P50458 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX2P50458 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX2P50458 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX2P50458 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LHX2P50458 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.25■□□□□ 0.83
LHX2P50458 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LHX2P50458 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.25■□□□□ 0.83
LHX2P50458 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX2P50458 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LHX2P50458 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LHX2P50458 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LHX2P50458 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LHX2P50458 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LHX2P50458 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.24■□□□□ 0.83
LHX2P50458 AC024257.2-201ENST00000549699 147 ntBASIC20.24■□□□□ 0.83
LHX2P50458 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LHX2P50458 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LHX2P50458 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LHX2P50458 SERBP1P1-201ENST00000396021 1160 ntBASIC20.23■□□□□ 0.83
LHX2P50458 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LHX2P50458 AC006455.2-201ENST00000429931 906 ntBASIC20.23■□□□□ 0.83
LHX2P50458 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LHX2P50458 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.23■□□□□ 0.83
LHX2P50458 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LHX2P50458 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LHX2P50458 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LHX2P50458 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LHX2P50458 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LHX2P50458 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LHX2P50458 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LHX2P50458 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.22■□□□□ 0.83
LHX2P50458 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
LHX2P50458 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.22■□□□□ 0.83
LHX2P50458 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.22■□□□□ 0.83
LHX2P50458 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.22■□□□□ 0.83
LHX2P50458 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.22■□□□□ 0.83
LHX2P50458 AC005837.3-201ENST00000612163 286 ntBASIC20.22■□□□□ 0.83
LHX2P50458 AC009086.3-201ENST00000623486 1008 ntBASIC20.22■□□□□ 0.83
LHX2P50458 ABCB10P4-201ENST00000566803 2184 ntBASIC20.22■□□□□ 0.83
LHX2P50458 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LHX2P50458 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.22■□□□□ 0.83
LHX2P50458 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.22■□□□□ 0.83
LHX2P50458 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LHX2P50458 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LHX2P50458 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LHX2P50458 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LHX2P50458 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.21■□□□□ 0.83
LHX2P50458 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.21■□□□□ 0.83
LHX2P50458 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
LHX2P50458 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.21■□□□□ 0.83
LHX2P50458 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LHX2P50458 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LHX2P50458 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LHX2P50458 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
LHX2P50458 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LHX2P50458 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LHX2P50458 AL138724.1-201ENST00000606771 1088 ntBASIC20.2■□□□□ 0.82
LHX2P50458 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LHX2P50458 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LHX2P50458 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LHX2P50458 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LHX2P50458 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.19■□□□□ 0.82
LHX2P50458 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.19■□□□□ 0.82
LHX2P50458 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LHX2P50458 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.19■□□□□ 0.82
LHX2P50458 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.19■□□□□ 0.82
LHX2P50458 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.19■□□□□ 0.82
LHX2P50458 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.19■□□□□ 0.82
LHX2P50458 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.19■□□□□ 0.82
LHX2P50458 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.19■□□□□ 0.82
LHX2P50458 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms