Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.75■□□□□ 0.91
HTR3AP46098 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HTR3AP46098 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HTR3AP46098 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HTR3AP46098 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HTR3AP46098 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HTR3AP46098 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HTR3AP46098 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HTR3AP46098 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HTR3AP46098 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.74■□□□□ 0.91
HTR3AP46098 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HTR3AP46098 KRT125P-201ENST00000546827 989 ntBASIC20.74■□□□□ 0.91
HTR3AP46098 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.74■□□□□ 0.91
HTR3AP46098 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HTR3AP46098 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HTR3AP46098 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HTR3AP46098 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HTR3AP46098 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HTR3AP46098 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HTR3AP46098 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HTR3AP46098 ALDH1A3-203ENST00000557963 1670 ntBASIC20.73■□□□□ 0.91
HTR3AP46098 ABCB10P4-201ENST00000566803 2184 ntBASIC20.73■□□□□ 0.91
HTR3AP46098 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.73■□□□□ 0.91
HTR3AP46098 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HTR3AP46098 AL117328.2-201ENST00000624617 1940 ntBASIC20.73■□□□□ 0.91
HTR3AP46098 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.73■□□□□ 0.91
HTR3AP46098 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HTR3AP46098 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HTR3AP46098 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HTR3AP46098 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
HTR3AP46098 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HTR3AP46098 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTR3AP46098 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTR3AP46098 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HTR3AP46098 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTR3AP46098 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTR3AP46098 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.72■□□□□ 0.91
HTR3AP46098 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HTR3AP46098 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.72■□□□□ 0.91
HTR3AP46098 SNX5-217ENST00000606557 1087 ntBASIC20.72■□□□□ 0.91
HTR3AP46098 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTR3AP46098 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HTR3AP46098 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTR3AP46098 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
HTR3AP46098 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HTR3AP46098 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTR3AP46098 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HTR3AP46098 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.72■□□□□ 0.91
HTR3AP46098 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HTR3AP46098 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HTR3AP46098 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HTR3AP46098 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HTR3AP46098 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HTR3AP46098 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HTR3AP46098 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HTR3AP46098 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HTR3AP46098 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HTR3AP46098 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HTR3AP46098 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
HTR3AP46098 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.7■□□□□ 0.9
HTR3AP46098 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HTR3AP46098 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.7■□□□□ 0.9
HTR3AP46098 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.7■□□□□ 0.9
HTR3AP46098 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.7■□□□□ 0.9
HTR3AP46098 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HTR3AP46098 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HTR3AP46098 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HTR3AP46098 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.69■□□□□ 0.9
HTR3AP46098 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.69■□□□□ 0.9
HTR3AP46098 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.69■□□□□ 0.9
HTR3AP46098 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HTR3AP46098 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HTR3AP46098 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.69■□□□□ 0.9
HTR3AP46098 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HTR3AP46098 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HTR3AP46098 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.69■□□□□ 0.9
HTR3AP46098 AC009299.2-201ENST00000482477 511 ntBASIC20.69■□□□□ 0.9
HTR3AP46098 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HTR3AP46098 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HTR3AP46098 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HTR3AP46098 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.69■□□□□ 0.9
HTR3AP46098 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HTR3AP46098 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HTR3AP46098 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
HTR3AP46098 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HTR3AP46098 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.68■□□□□ 0.9
HTR3AP46098 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HTR3AP46098 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.68■□□□□ 0.9
HTR3AP46098 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.68■□□□□ 0.9
HTR3AP46098 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HTR3AP46098 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
HTR3AP46098 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
HTR3AP46098 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.68■□□□□ 0.9
HTR3AP46098 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HTR3AP46098 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.68■□□□□ 0.9
HTR3AP46098 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HTR3AP46098 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HTR3AP46098 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HTR3AP46098 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.68■□□□□ 0.9
HTR3AP46098 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms