Protein–RNA interactions for Protein: P40968

CDC40, Pre-mRNA-processing factor 17, yeastyeast

Predicted RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC40P40968 BSD2YBR290W 966 nt4.08□□□□□ -1.76
CDC40P40968 BCH2YKR027W 2298 nt4.07□□□□□ -1.76
CDC40P40968 TCM62YBR044C 1719 nt4.07□□□□□ -1.76
CDC40P40968 IZH3YLR023C 1632 nt4.07□□□□□ -1.76
CDC40P40968 SLC1YDL052C 912 nt4.07□□□□□ -1.76
CDC40P40968 ERV14YGL054C 417 nt4.07□□□□□ -1.76
CDC40P40968 TIM21YGR033C 720 nt4.07□□□□□ -1.76
CDC40P40968 ECM19YLR390W 339 nt4.07□□□□□ -1.76
CDC40P40968 POP3YNL282W 588 nt4.07□□□□□ -1.76
CDC40P40968 SHE10YGL228W 1734 nt4.07□□□□□ -1.76
CDC40P40968 PRR1YKL116C 1557 nt4.06□□□□□ -1.76
CDC40P40968 CDC19YAL038W 1503 nt4.06□□□□□ -1.76
CDC40P40968 NGL3YML118W 1518 nt4.06□□□□□ -1.76
CDC40P40968 UBX7YBR273C 1311 nt4.06□□□□□ -1.76
CDC40P40968 PDR5YOR153W 4536 nt4.06□□□□□ -1.76
CDC40P40968 COS7YDL248W 1152 nt4.06□□□□□ -1.76
CDC40P40968 DFM1YDR411C 1026 nt4.06□□□□□ -1.76
CDC40P40968 PFA5YDR459C 1125 nt4.06□□□□□ -1.76
CDC40P40968 YGL193CYGL193C 312 nt4.06□□□□□ -1.76
CDC40P40968 YAE1YJR067C 426 nt4.06□□□□□ -1.76
CDC40P40968 COS5YJR161C 1152 nt4.06□□□□□ -1.76
CDC40P40968 YLR126CYLR126C 756 nt4.06□□□□□ -1.76
CDC40P40968 PGA3YML125C 939 nt4.06□□□□□ -1.76
CDC40P40968 AST1YBL069W 1290 nt4.06□□□□□ -1.76
CDC40P40968 MET31YPL038W 534 nt4.06□□□□□ -1.76
CDC40P40968 RPL21BYPL079W 483 nt4.06□□□□□ -1.76
CDC40P40968 VID22YLR373C 2706 nt4.06□□□□□ -1.76
CDC40P40968 NFI1YOR156C 2181 nt4.06□□□□□ -1.76
CDC40P40968 PUF3YLL013C 2640 nt4.06□□□□□ -1.76
CDC40P40968 COQ6YGR255C 1440 nt4.05□□□□□ -1.76
CDC40P40968 SAT4YCR008W 1812 nt4.05□□□□□ -1.76
CDC40P40968 HMG1YML075C 3165 nt4.05□□□□□ -1.76
CDC40P40968 BOP2YLR267W 1713 nt4.05□□□□□ -1.76
CDC40P40968 TRM44YPL030W 1704 nt4.05□□□□□ -1.76
CDC40P40968 ERD1YDR414C 1089 nt4.05□□□□□ -1.76
CDC40P40968 EGD2YHR193C 525 nt4.05□□□□□ -1.76
CDC40P40968 PAN6YIL145C 930 nt4.05□□□□□ -1.76
CDC40P40968 PSR1YLL010C 1284 nt4.05□□□□□ -1.76
CDC40P40968 SHP1YBL058W 1272 nt4.05□□□□□ -1.76
CDC40P40968 NCE103YNL036W 666 nt4.05□□□□□ -1.76
CDC40P40968 snR19snR19 568 nt4.05□□□□□ -1.76
CDC40P40968 YCL012CYCL012C 405 nt4.05□□□□□ -1.76
CDC40P40968 KAR2YJL034W 2049 nt4.05□□□□□ -1.76
CDC40P40968 OPT2YPR194C 2634 nt4.05□□□□□ -1.76
CDC40P40968 THS1YIL078W 2205 nt4.05□□□□□ -1.76
CDC40P40968 HER2YMR293C 1395 nt4.04□□□□□ -1.76
CDC40P40968 YHR045WYHR045W 1683 nt4.04□□□□□ -1.76
CDC40P40968 MIH1YMR036C 1665 nt4.04□□□□□ -1.76
CDC40P40968 GEP3YOR205C 1671 nt4.04□□□□□ -1.76
CDC40P40968 YDL172CYDL172C 480 nt4.04□□□□□ -1.76
CDC40P40968 YEL045CYEL045C 426 nt4.04□□□□□ -1.76
CDC40P40968 YGR015CYGR015C 987 nt4.04□□□□□ -1.76
CDC40P40968 DAN1YJR150C 897 nt4.04□□□□□ -1.76
CDC40P40968 MRT4YKL009W 711 nt4.04□□□□□ -1.76
CDC40P40968 YLR402WYLR402W 192 nt4.04□□□□□ -1.76
CDC40P40968 ETT1YOR051C 1239 nt4.04□□□□□ -1.76
CDC40P40968 GSP2YOR185C 663 nt4.04□□□□□ -1.76
CDC40P40968 YBR056C-BYBR056C-B 159 nt4.04□□□□□ -1.76
CDC40P40968 snR37snR37 386 nt4.04□□□□□ -1.76
CDC40P40968 GPB1YOR371C 2694 nt4.04□□□□□ -1.76
CDC40P40968 MPS3YJL019W 2049 nt4.04□□□□□ -1.76
CDC40P40968 TRM13YOL125W 1431 nt4.04□□□□□ -1.76
CDC40P40968 YER077CYER077C 2067 nt4.03□□□□□ -1.76
CDC40P40968 SYF1YDR416W 2580 nt4.03□□□□□ -1.76
CDC40P40968 YHL049CYHL049C 816 nt4.03□□□□□ -1.76
CDC40P40968 SPO7YAL009W 780 nt4.03□□□□□ -1.76
CDC40P40968 RNA1YMR235C 1224 nt4.03□□□□□ -1.76
CDC40P40968 DCS2YOR173W 1062 nt4.03□□□□□ -1.76
CDC40P40968 INA17YPL099C 549 nt4.03□□□□□ -1.76
CDC40P40968 CMR3YPR013C 954 nt4.03□□□□□ -1.76
CDC40P40968 YCL041CYCL041C 495 nt4.03□□□□□ -1.76
CDC40P40968 FAA1YOR317W 2103 nt4.03□□□□□ -1.76
CDC40P40968 CTF18YMR078C 2226 nt4.02□□□□□ -1.77
CDC40P40968 YCR047W-AYCR047W-A 207 nt4.02□□□□□ -1.77
CDC40P40968 TRS23YDR246W 660 nt4.02□□□□□ -1.77
CDC40P40968 TFB3YDR460W 966 nt4.02□□□□□ -1.77
CDC40P40968 CAF16YFL028C 870 nt4.02□□□□□ -1.77
CDC40P40968 YGR273CYGR273C 525 nt4.02□□□□□ -1.77
CDC40P40968 VPS71YML041C 843 nt4.02□□□□□ -1.77
CDC40P40968 ATG14YBR128C 1035 nt4.02□□□□□ -1.77
CDC40P40968 THI20YOL055C 1656 nt4.02□□□□□ -1.77
CDC40P40968 PTR3YFR029W 2037 nt4.02□□□□□ -1.77
CDC40P40968 ADY3YDL239C 2373 nt4.02□□□□□ -1.77
CDC40P40968 YML020WYML020W 1995 nt4.02□□□□□ -1.77
CDC40P40968 ULA1YPL003W 1389 nt4.02□□□□□ -1.77
CDC40P40968 YDL144CYDL144C 1071 nt4.01□□□□□ -1.77
CDC40P40968 YDR417CYDR417C 372 nt4.01□□□□□ -1.77
CDC40P40968 YEL067CYEL067C 588 nt4.01□□□□□ -1.77
CDC40P40968 RFC2YJR068W 1062 nt4.01□□□□□ -1.77
CDC40P40968 YKR075CYKR075C 924 nt4.01□□□□□ -1.77
CDC40P40968 YMR245WYMR245W 621 nt4.01□□□□□ -1.77
CDC40P40968 ROX3YBL093C 663 nt4.01□□□□□ -1.77
CDC40P40968 ETR1YBR026C 1143 nt4.01□□□□□ -1.77
CDC40P40968 MRI1YPR118W 1236 nt4.01□□□□□ -1.77
CDC40P40968 MRPL36YBR122C 534 nt4.01□□□□□ -1.77
CDC40P40968 IDS2YJL146W 1410 nt4.01□□□□□ -1.77
CDC40P40968 GDE1YPL110C 3672 nt4.01□□□□□ -1.77
CDC40P40968 HCM1YCR065W 1695 nt4□□□□□ -1.77
CDC40P40968 RKM3YBR030W 1659 nt4□□□□□ -1.77
CDC40P40968 IMA3YIL172C 1770 nt4□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 20.6 ms