Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 ISR1YPR106W 1332 nt5.31□□□□□ -1.56
RTR1P40084 TMA17YDL110C 453 nt5.31□□□□□ -1.56
RTR1P40084 HXT5YHR096C 1779 nt5.31□□□□□ -1.56
RTR1P40084 CYM1YDR430C 2970 nt5.31□□□□□ -1.56
RTR1P40084 YDR133CYDR133C 336 nt5.3□□□□□ -1.56
RTR1P40084 PIC2YER053C 903 nt5.3□□□□□ -1.56
RTR1P40084 tL(UAG)JtL(UAG)J 82 nt5.3□□□□□ -1.56
RTR1P40084 tL(UAG)L1tL(UAG)L1 82 nt5.3□□□□□ -1.56
RTR1P40084 tL(UAG)L2tL(UAG)L2 82 nt5.3□□□□□ -1.56
RTR1P40084 TYS1YGR185C 1185 nt5.3□□□□□ -1.56
RTR1P40084 RPS4BYHR203C 786 nt5.3□□□□□ -1.56
RTR1P40084 RPS4AYJR145C 786 nt5.3□□□□□ -1.56
RTR1P40084 VPS69YPR087W 321 nt5.3□□□□□ -1.56
RTR1P40084 RAD53YPL153C 2466 nt5.3□□□□□ -1.56
RTR1P40084 HOYDL227C 1761 nt5.29□□□□□ -1.56
RTR1P40084 PTC1YDL006W 846 nt5.29□□□□□ -1.56
RTR1P40084 URA3YEL021W 804 nt5.29□□□□□ -1.56
RTR1P40084 MNN11YJL183W 1269 nt5.29□□□□□ -1.56
RTR1P40084 CPR6YLR216C 1116 nt5.29□□□□□ -1.56
RTR1P40084 SEC72YLR292C 582 nt5.29□□□□□ -1.56
RTR1P40084 HEK2YBL032W 1146 nt5.29□□□□□ -1.56
RTR1P40084 SUI1YNL244C 327 nt5.29□□□□□ -1.56
RTR1P40084 HOF1YMR032W 2010 nt5.29□□□□□ -1.56
RTR1P40084 FAR10YLR238W 1437 nt5.29□□□□□ -1.56
RTR1P40084 FLC1YPL221W 2382 nt5.29□□□□□ -1.56
RTR1P40084 PEX30YLR324W 1572 nt5.29□□□□□ -1.56
RTR1P40084 YFT2YDR319C 825 nt5.28□□□□□ -1.56
RTR1P40084 UBC8YEL012W 657 nt5.28□□□□□ -1.56
RTR1P40084 NPY1YGL067W 1155 nt5.28□□□□□ -1.56
RTR1P40084 EXO1YOR033C 2109 nt5.28□□□□□ -1.56
RTR1P40084 ODC2YOR222W 924 nt5.28□□□□□ -1.56
RTR1P40084 DSS4YPR017C 432 nt5.28□□□□□ -1.56
RTR1P40084 YTH1YPR107C 627 nt5.28□□□□□ -1.56
RTR1P40084 RSC58YLR033W 1509 nt5.28□□□□□ -1.56
RTR1P40084 LYS2YBR115C 4179 nt5.27□□□□□ -1.57
RTR1P40084 YDL228CYDL228C 642 nt5.27□□□□□ -1.57
RTR1P40084 THI13YDL244W 1023 nt5.27□□□□□ -1.57
RTR1P40084 RPL12AYEL054C 498 nt5.27□□□□□ -1.57
RTR1P40084 MIC26YGR235C 702 nt5.27□□□□□ -1.57
RTR1P40084 PHO86YJL117W 936 nt5.27□□□□□ -1.57
RTR1P40084 THI11YJR156C 1023 nt5.27□□□□□ -1.57
RTR1P40084 MRPL3YMR024W 1173 nt5.27□□□□□ -1.57
RTR1P40084 NRM1YNR009W 750 nt5.27□□□□□ -1.57
RTR1P40084 PEP5YMR231W 3090 nt5.27□□□□□ -1.57
RTR1P40084 SPC105YGL093W 2754 nt5.27□□□□□ -1.57
RTR1P40084 DPB4YDR121W 591 nt5.26□□□□□ -1.57
RTR1P40084 YDR246W-AYDR246W-A 201 nt5.26□□□□□ -1.57
RTR1P40084 AAD6YFL056C 639 nt5.26□□□□□ -1.57
RTR1P40084 RPL24AYGL031C 468 nt5.26□□□□□ -1.57
RTR1P40084 ARC1YGL105W 1131 nt5.26□□□□□ -1.57
RTR1P40084 YDC1YPL087W 954 nt5.26□□□□□ -1.57
RTR1P40084 PBN1YCL052C 1251 nt5.26□□□□□ -1.57
RTR1P40084 OLE1YGL055W 1533 nt5.26□□□□□ -1.57
RTR1P40084 MPP10YJR002W 1782 nt5.26□□□□□ -1.57
RTR1P40084 CDC48YDL126C 2508 nt5.25□□□□□ -1.57
RTR1P40084 YGL088WYGL088W 366 nt5.25□□□□□ -1.57
RTR1P40084 YLH47YPR125W 1365 nt5.25□□□□□ -1.57
RTR1P40084 PHM8YER037W 966 nt5.24□□□□□ -1.57
RTR1P40084 YGL185CYGL185C 1140 nt5.24□□□□□ -1.57
RTR1P40084 MRP4YHL004W 1185 nt5.24□□□□□ -1.57
RTR1P40084 YPL025CYPL025C 558 nt5.24□□□□□ -1.57
RTR1P40084 POP4YBR257W 840 nt5.24□□□□□ -1.57
RTR1P40084 GAS3YMR215W 1575 nt5.24□□□□□ -1.57
RTR1P40084 DBF2YGR092W 1719 nt5.23□□□□□ -1.57
RTR1P40084 YIR017W-AYIR017W-A 600 nt5.23□□□□□ -1.57
RTR1P40084 CKA2YOR061W 1020 nt5.23□□□□□ -1.57
RTR1P40084 BUD14YAR014C 2130 nt5.23□□□□□ -1.57
RTR1P40084 MAL13YGR288W 1422 nt5.23□□□□□ -1.57
RTR1P40084 ARN2YHL047C 1863 nt5.22□□□□□ -1.57
RTR1P40084 YJR038CYJR038C 363 nt5.22□□□□□ -1.57
RTR1P40084 PER33YLR064W 822 nt5.22□□□□□ -1.57
RTR1P40084 RFU1YLR073C 603 nt5.22□□□□□ -1.57
RTR1P40084 NPT1YOR209C 1290 nt5.22□□□□□ -1.57
RTR1P40084 ECM33YBR078W 1290 nt5.22□□□□□ -1.57
RTR1P40084 YCL021W-AYCL021W-A 378 nt5.22□□□□□ -1.57
RTR1P40084 NGL2YMR285C 1548 nt5.22□□□□□ -1.57
RTR1P40084 ADE6YGR061C 4077 nt5.22□□□□□ -1.57
RTR1P40084 XKS1YGR194C 1803 nt5.21□□□□□ -1.58
RTR1P40084 HSP30YCR021C 999 nt5.21□□□□□ -1.58
RTR1P40084 RPS16BYDL083C 432 nt5.21□□□□□ -1.58
RTR1P40084 CAF16YFL028C 870 nt5.21□□□□□ -1.58
RTR1P40084 HPM1YIL110W 1134 nt5.21□□□□□ -1.58
RTR1P40084 HSP82YPL240C 2130 nt5.21□□□□□ -1.58
RTR1P40084 YTA6YPL074W 2265 nt5.21□□□□□ -1.58
RTR1P40084 BUD8YLR353W 1812 nt5.2□□□□□ -1.58
RTR1P40084 KCH1YJR054W 1494 nt5.2□□□□□ -1.58
RTR1P40084 YNL165WYNL165W 1221 nt5.19□□□□□ -1.58
RTR1P40084 RDL1YOR285W 420 nt5.19□□□□□ -1.58
RTR1P40084 snR32snR32 188 nt5.19□□□□□ -1.58
RTR1P40084 KCC4YCL024W 3114 nt5.19□□□□□ -1.58
RTR1P40084 EMP47YFL048C 1338 nt5.19□□□□□ -1.58
RTR1P40084 ARG4YHR018C 1392 nt5.18□□□□□ -1.58
RTR1P40084 URA7YBL039C 1740 nt5.18□□□□□ -1.58
RTR1P40084 snR7-LsnR7-L 214 nt5.18□□□□□ -1.58
RTR1P40084 YKE4YIL023C 1041 nt5.18□□□□□ -1.58
RTR1P40084 YML116W-AYML116W-A 303 nt5.18□□□□□ -1.58
RTR1P40084 YMR030W-AYMR030W-A 291 nt5.18□□□□□ -1.58
RTR1P40084 ASK10YGR097W 3441 nt5.17□□□□□ -1.58
RTR1P40084 KRE29YER038C 1395 nt5.17□□□□□ -1.58
RTR1P40084 MST1YKL194C 1389 nt5.17□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 19.3 ms