Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.27■□□□□ 0.68
CDKN1AP38936 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.27■□□□□ 0.67
CDKN1AP38936 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN1AP38936 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CDKN1AP38936 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN1AP38936 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN1AP38936 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.26■□□□□ 0.67
CDKN1AP38936 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.26■□□□□ 0.67
CDKN1AP38936 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.26■□□□□ 0.67
CDKN1AP38936 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
CDKN1AP38936 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.26■□□□□ 0.67
CDKN1AP38936 AC136469.2-201ENST00000623944 1028 ntBASIC19.26■□□□□ 0.67
CDKN1AP38936 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN1AP38936 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN1AP38936 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDKN1AP38936 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN1AP38936 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN1AP38936 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN1AP38936 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.25■□□□□ 0.67
CDKN1AP38936 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN1AP38936 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKN1AP38936 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN1AP38936 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN1AP38936 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN1AP38936 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKN1AP38936 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.25■□□□□ 0.67
CDKN1AP38936 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN1AP38936 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN1AP38936 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN1AP38936 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN1AP38936 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN1AP38936 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.24■□□□□ 0.67
CDKN1AP38936 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN1AP38936 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN1AP38936 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN1AP38936 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.24■□□□□ 0.67
CDKN1AP38936 IRS3P-201ENST00000223076 1006 ntBASIC19.24■□□□□ 0.67
CDKN1AP38936 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN1AP38936 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN1AP38936 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.24■□□□□ 0.67
CDKN1AP38936 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.24■□□□□ 0.67
CDKN1AP38936 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.24■□□□□ 0.67
CDKN1AP38936 MIR6821-201ENST00000617625 74 ntBASIC19.24■□□□□ 0.67
CDKN1AP38936 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.24■□□□□ 0.67
CDKN1AP38936 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CDKN1AP38936 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CDKN1AP38936 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN1AP38936 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN1AP38936 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.23■□□□□ 0.67
CDKN1AP38936 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKN1AP38936 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKN1AP38936 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKN1AP38936 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDKN1AP38936 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CDKN1AP38936 MIR3181-201ENST00000578512 73 ntBASIC19.23■□□□□ 0.67
CDKN1AP38936 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.23■□□□□ 0.67
CDKN1AP38936 AC087623.3-201ENST00000607047 1098 ntBASIC19.23■□□□□ 0.67
CDKN1AP38936 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.23■□□□□ 0.67
CDKN1AP38936 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKN1AP38936 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDKN1AP38936 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDKN1AP38936 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKN1AP38936 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKN1AP38936 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKN1AP38936 AC097381.1-201ENST00000429019 1296 ntBASIC19.22■□□□□ 0.67
CDKN1AP38936 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKN1AP38936 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDKN1AP38936 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKN1AP38936 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CDKN1AP38936 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKN1AP38936 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKN1AP38936 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.21■□□□□ 0.67
CDKN1AP38936 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.21■□□□□ 0.67
CDKN1AP38936 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKN1AP38936 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKN1AP38936 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKN1AP38936 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.21■□□□□ 0.67
CDKN1AP38936 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.21■□□□□ 0.67
CDKN1AP38936 AL161729.1-201ENST00000604104 1402 ntBASIC19.21■□□□□ 0.67
CDKN1AP38936 AC233992.3-201ENST00000607491 485 ntBASIC19.21■□□□□ 0.67
CDKN1AP38936 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDKN1AP38936 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.21■□□□□ 0.67
CDKN1AP38936 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDKN1AP38936 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKN1AP38936 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.21■□□□□ 0.67
CDKN1AP38936 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDKN1AP38936 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CDKN1AP38936 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDKN1AP38936 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKN1AP38936 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDKN1AP38936 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.2■□□□□ 0.66
CDKN1AP38936 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.2■□□□□ 0.66
CDKN1AP38936 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.2■□□□□ 0.66
CDKN1AP38936 pRNA.6-201ENST00000610482 90 ntBASIC19.2■□□□□ 0.66
CDKN1AP38936 pRNA.5-201ENST00000612139 90 ntBASIC19.2■□□□□ 0.66
CDKN1AP38936 pRNA.11-201ENST00000618423 90 ntBASIC19.2■□□□□ 0.66
CDKN1AP38936 pRNA.13-201ENST00000619112 90 ntBASIC19.2■□□□□ 0.66
CDKN1AP38936 ALDH1A3-203ENST00000557963 1670 ntBASIC19.2■□□□□ 0.66
CDKN1AP38936 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDKN1AP38936 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms