Protein–RNA interactions for Protein: P38915

SPT8, Transcription factor SPT8, yeastyeast

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT8P38915 tK(CUU)CtK(CUU)C 73 nt4.95□□□□□ -1.62
SPT8P38915 tK(CUU)D1tK(CUU)D1 73 nt4.95□□□□□ -1.62
SPT8P38915 tK(CUU)D2tK(CUU)D2 73 nt4.95□□□□□ -1.62
SPT8P38915 tK(CUU)E1tK(CUU)E1 73 nt4.95□□□□□ -1.62
SPT8P38915 tK(CUU)E2tK(CUU)E2 73 nt4.95□□□□□ -1.62
SPT8P38915 tK(CUU)FtK(CUU)F 73 nt4.95□□□□□ -1.62
SPT8P38915 tK(CUU)G1tK(CUU)G1 73 nt4.95□□□□□ -1.62
SPT8P38915 tK(CUU)G2tK(CUU)G2 73 nt4.95□□□□□ -1.62
SPT8P38915 tK(CUU)G3tK(CUU)G3 73 nt4.95□□□□□ -1.62
SPT8P38915 tK(CUU)ItK(CUU)I 73 nt4.95□□□□□ -1.62
SPT8P38915 tK(CUU)JtK(CUU)J 73 nt4.95□□□□□ -1.62
SPT8P38915 tK(CUU)KtK(CUU)K 73 nt4.95□□□□□ -1.62
SPT8P38915 tK(CUU)MtK(CUU)M 73 nt4.95□□□□□ -1.62
SPT8P38915 tK(CUU)PtK(CUU)P 73 nt4.95□□□□□ -1.62
SPT8P38915 LSO1YJR005C-A 282 nt4.95□□□□□ -1.62
SPT8P38915 YMR010WYMR010W 1218 nt4.95□□□□□ -1.62
SPT8P38915 RAD16YBR114W 2373 nt4.95□□□□□ -1.62
SPT8P38915 NMD3YHR170W 1557 nt4.95□□□□□ -1.62
SPT8P38915 SAP4YGL229C 2457 nt4.95□□□□□ -1.62
SPT8P38915 CBF5YLR175W 1452 nt4.94□□□□□ -1.62
SPT8P38915 YCR006CYCR006C 474 nt4.94□□□□□ -1.62
SPT8P38915 YDL012CYDL012C 324 nt4.94□□□□□ -1.62
SPT8P38915 COQ4YDR204W 1008 nt4.94□□□□□ -1.62
SPT8P38915 PRM1YNL279W 1986 nt4.94□□□□□ -1.62
SPT8P38915 PRD1YCL057W 2139 nt4.94□□□□□ -1.62
SPT8P38915 SWC3YAL011W 1878 nt4.94□□□□□ -1.62
SPT8P38915 ISR1YPR106W 1332 nt4.94□□□□□ -1.62
SPT8P38915 GAD1YMR250W 1758 nt4.93□□□□□ -1.62
SPT8P38915 OLE1YGL055W 1533 nt4.93□□□□□ -1.62
SPT8P38915 STB2YMR053C 2553 nt4.93□□□□□ -1.62
SPT8P38915 CAB3YKL088W 1716 nt4.93□□□□□ -1.62
SPT8P38915 NNK1YKL171W 2787 nt4.93□□□□□ -1.62
SPT8P38915 ELC1YPL046C 300 nt4.93□□□□□ -1.62
SPT8P38915 UBA3YPR066W 900 nt4.93□□□□□ -1.62
SPT8P38915 snR3snR3 194 nt4.93□□□□□ -1.62
SPT8P38915 LDB17YDL146W 1476 nt4.93□□□□□ -1.62
SPT8P38915 COA3YJL062W-A 258 nt4.92□□□□□ -1.62
SPT8P38915 YNL134CYNL134C 1131 nt4.92□□□□□ -1.62
SPT8P38915 snR19snR19 568 nt4.92□□□□□ -1.62
SPT8P38915 MSC2YDR205W 2175 nt4.92□□□□□ -1.62
SPT8P38915 NUP2YLR335W 2163 nt4.91□□□□□ -1.62
SPT8P38915 ALG6YOR002W 1635 nt4.91□□□□□ -1.62
SPT8P38915 SPR28YDR218C 1272 nt4.91□□□□□ -1.62
SPT8P38915 FBP1YLR377C 1047 nt4.91□□□□□ -1.62
SPT8P38915 PZF1YPR186C 1290 nt4.91□□□□□ -1.62
SPT8P38915 CTT1YGR088W 1689 nt4.91□□□□□ -1.62
SPT8P38915 ATM1YMR301C 2073 nt4.91□□□□□ -1.62
SPT8P38915 TDA11YHR159W 1515 nt4.91□□□□□ -1.62
SPT8P38915 SBE2YDR351W 2595 nt4.91□□□□□ -1.62
SPT8P38915 IMA3YIL172C 1770 nt4.91□□□□□ -1.62
SPT8P38915 IMA4YJL221C 1770 nt4.91□□□□□ -1.62
SPT8P38915 IMD2YHR216W 1572 nt4.91□□□□□ -1.62
SPT8P38915 MAG2YLR427W 2013 nt4.9□□□□□ -1.62
SPT8P38915 STR2YJR130C 1920 nt4.9□□□□□ -1.62
SPT8P38915 NAT2YGR147C 867 nt4.9□□□□□ -1.63
SPT8P38915 TVP38YKR088C 1014 nt4.9□□□□□ -1.63
SPT8P38915 YMR105W-AYMR105W-A 195 nt4.9□□□□□ -1.63
SPT8P38915 YNL194CYNL194C 906 nt4.9□□□□□ -1.63
SPT8P38915 YBR016WYBR016W 387 nt4.9□□□□□ -1.63
SPT8P38915 SLD2YKL108W 1362 nt4.9□□□□□ -1.63
SPT8P38915 SMP1YBR182C 1359 nt4.9□□□□□ -1.63
SPT8P38915 YPL260WYPL260W 1656 nt4.89□□□□□ -1.63
SPT8P38915 CPR4YCR069W 957 nt4.89□□□□□ -1.63
SPT8P38915 MAD2YJL030W 591 nt4.89□□□□□ -1.63
SPT8P38915 SPO19YPL130W 672 nt4.89□□□□□ -1.63
SPT8P38915 TPO2YGR138C 1845 nt4.88□□□□□ -1.63
SPT8P38915 IML2YJL082W 2196 nt4.88□□□□□ -1.63
SPT8P38915 NOP58YOR310C 1536 nt4.88□□□□□ -1.63
SPT8P38915 ESF1YDR365C 1887 nt4.88□□□□□ -1.63
SPT8P38915 YFR034W-AYFR034W-A 288 nt4.88□□□□□ -1.63
SPT8P38915 tS(AGA)D3tS(AGA)D3 83 nt4.88□□□□□ -1.63
SPT8P38915 MGR2YPL098C 342 nt4.88□□□□□ -1.63
SPT8P38915 MLF3YNL074C 1359 nt4.88□□□□□ -1.63
SPT8P38915 MOT2YER068W 1764 nt4.88□□□□□ -1.63
SPT8P38915 TRE1YPL176C 2352 nt4.87□□□□□ -1.63
SPT8P38915 ARP10YDR106W 855 nt4.87□□□□□ -1.63
SPT8P38915 YOR342CYOR342C 960 nt4.87□□□□□ -1.63
SPT8P38915 POP4YBR257W 840 nt4.87□□□□□ -1.63
SPT8P38915 GRC3YLL035W 1899 nt4.87□□□□□ -1.63
SPT8P38915 ARG4YHR018C 1392 nt4.87□□□□□ -1.63
SPT8P38915 HUL4YJR036C 2679 nt4.86□□□□□ -1.63
SPT8P38915 MET4YNL103W 2019 nt4.86□□□□□ -1.63
SPT8P38915 YDR274CYDR274C 372 nt4.86□□□□□ -1.63
SPT8P38915 RNA15YGL044C 891 nt4.86□□□□□ -1.63
SPT8P38915 SWP1YMR149W 861 nt4.86□□□□□ -1.63
SPT8P38915 GPI12YMR281W 915 nt4.86□□□□□ -1.63
SPT8P38915 REI1YBR267W 1182 nt4.86□□□□□ -1.63
SPT8P38915 KCC4YCL024W 3114 nt4.86□□□□□ -1.63
SPT8P38915 KIC1YHR102W 3243 nt4.86□□□□□ -1.63
SPT8P38915 BSC5YNR069C 1470 nt4.86□□□□□ -1.63
SPT8P38915 FDC1YDR539W 1512 nt4.86□□□□□ -1.63
SPT8P38915 YMR221CYMR221C 1515 nt4.86□□□□□ -1.63
SPT8P38915 PRP40YKL012W 1752 nt4.86□□□□□ -1.63
SPT8P38915 PER1YCR044C 1074 nt4.85□□□□□ -1.63
SPT8P38915 HSP31YDR533C 714 nt4.85□□□□□ -1.63
SPT8P38915 CIA2YHR122W 696 nt4.85□□□□□ -1.63
SPT8P38915 YIL021C-AYIL021C-A 270 nt4.85□□□□□ -1.63
SPT8P38915 YIL165CYIL165C 360 nt4.85□□□□□ -1.63
SPT8P38915 RFU1YLR073C 603 nt4.85□□□□□ -1.63
SPT8P38915 CUS2YNL286W 858 nt4.85□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 16.8 ms