Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.91■□□□□ 0.78
ERCC1P07992 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ERCC1P07992 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC1P07992 AC079834.2-201ENST00000609776 1949 ntBASIC19.9■□□□□ 0.78
ERCC1P07992 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC1P07992 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC1P07992 AL161729.1-201ENST00000604104 1402 ntBASIC19.9■□□□□ 0.78
ERCC1P07992 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC1P07992 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC1P07992 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ERCC1P07992 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.9■□□□□ 0.78
ERCC1P07992 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
ERCC1P07992 AC090877.2-201ENST00000558441 1738 ntBASIC19.89■□□□□ 0.77
ERCC1P07992 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC1P07992 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC1P07992 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.89■□□□□ 0.77
ERCC1P07992 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ERCC1P07992 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC1P07992 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.88■□□□□ 0.77
ERCC1P07992 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.88■□□□□ 0.77
ERCC1P07992 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC1P07992 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC1P07992 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ERCC1P07992 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC1P07992 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ERCC1P07992 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC1P07992 UNC93B8-201ENST00000511903 705 ntBASIC19.88■□□□□ 0.77
ERCC1P07992 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.88■□□□□ 0.77
ERCC1P07992 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ERCC1P07992 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
ERCC1P07992 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC1P07992 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC1P07992 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.87■□□□□ 0.77
ERCC1P07992 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC1P07992 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.87■□□□□ 0.77
ERCC1P07992 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
ERCC1P07992 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC1P07992 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.87■□□□□ 0.77
ERCC1P07992 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC1P07992 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ERCC1P07992 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC1P07992 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC1P07992 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC1P07992 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.86■□□□□ 0.77
ERCC1P07992 AC010997.5-201ENST00000609182 354 ntBASIC19.86■□□□□ 0.77
ERCC1P07992 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.86■□□□□ 0.77
ERCC1P07992 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC1P07992 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ERCC1P07992 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
ERCC1P07992 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC1P07992 AC008406.3-201ENST00000620001 1374 ntBASIC19.85■□□□□ 0.77
ERCC1P07992 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC1P07992 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.85■□□□□ 0.77
ERCC1P07992 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC1P07992 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.85■□□□□ 0.77
ERCC1P07992 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC1P07992 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC1P07992 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC1P07992 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC1P07992 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.85■□□□□ 0.77
ERCC1P07992 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ERCC1P07992 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC1P07992 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC1P07992 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ERCC1P07992 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC1P07992 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC1P07992 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.84■□□□□ 0.77
ERCC1P07992 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC1P07992 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC1P07992 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC1P07992 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC1P07992 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC1P07992 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERCC1P07992 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.84■□□□□ 0.77
ERCC1P07992 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.83■□□□□ 0.77
ERCC1P07992 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.83■□□□□ 0.77
ERCC1P07992 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.83■□□□□ 0.77
ERCC1P07992 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.83■□□□□ 0.77
ERCC1P07992 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
ERCC1P07992 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.83■□□□□ 0.77
ERCC1P07992 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.83■□□□□ 0.77
ERCC1P07992 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.83■□□□□ 0.77
ERCC1P07992 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ERCC1P07992 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ERCC1P07992 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ERCC1P07992 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ERCC1P07992 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ERCC1P07992 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC1P07992 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC1P07992 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC1P07992 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
ERCC1P07992 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.82■□□□□ 0.76
ERCC1P07992 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERCC1P07992 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC1P07992 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.81■□□□□ 0.76
ERCC1P07992 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC1P07992 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC1P07992 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.81■□□□□ 0.76
ERCC1P07992 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC1P07992 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms