Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
MT-ND3P03897 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.9■■□□□ 1.26
MT-ND3P03897 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MT-ND3P03897 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
MT-ND3P03897 CLDN5-201ENST00000403084 2357 ntBASIC22.9■■□□□ 1.26
MT-ND3P03897 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.9■■□□□ 1.26
MT-ND3P03897 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
MT-ND3P03897 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
MT-ND3P03897 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
MT-ND3P03897 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
MT-ND3P03897 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
MT-ND3P03897 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
MT-ND3P03897 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.89■■□□□ 1.25
MT-ND3P03897 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
MT-ND3P03897 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MT-ND3P03897 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MT-ND3P03897 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MT-ND3P03897 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
MT-ND3P03897 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
MT-ND3P03897 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MT-ND3P03897 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MT-ND3P03897 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.88■■□□□ 1.25
MT-ND3P03897 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
MT-ND3P03897 LONRF2P2-201ENST00000439212 571 ntBASIC22.88■■□□□ 1.25
MT-ND3P03897 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.88■■□□□ 1.25
MT-ND3P03897 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
MT-ND3P03897 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MT-ND3P03897 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.88■■□□□ 1.25
MT-ND3P03897 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.87■■□□□ 1.25
MT-ND3P03897 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MT-ND3P03897 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
MT-ND3P03897 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
MT-ND3P03897 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
MT-ND3P03897 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
MT-ND3P03897 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
MT-ND3P03897 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MT-ND3P03897 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
MT-ND3P03897 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
MT-ND3P03897 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.87■■□□□ 1.25
MT-ND3P03897 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.87■■□□□ 1.25
MT-ND3P03897 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
MT-ND3P03897 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.87■■□□□ 1.25
MT-ND3P03897 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.87■■□□□ 1.25
MT-ND3P03897 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
MT-ND3P03897 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
MT-ND3P03897 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
MT-ND3P03897 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
MT-ND3P03897 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
MT-ND3P03897 EP400NL-214ENST00000641289 2402 ntBASIC22.86■■□□□ 1.25
MT-ND3P03897 C1orf229-201ENST00000623686 2258 ntBASIC22.86■■□□□ 1.25
MT-ND3P03897 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
MT-ND3P03897 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.86■■□□□ 1.25
MT-ND3P03897 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
MT-ND3P03897 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
MT-ND3P03897 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.85■■□□□ 1.25
MT-ND3P03897 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MT-ND3P03897 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
MT-ND3P03897 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MT-ND3P03897 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MT-ND3P03897 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.85■■□□□ 1.25
MT-ND3P03897 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
MT-ND3P03897 AC022616.5-201ENST00000518796 181 ntBASIC22.85■■□□□ 1.25
MT-ND3P03897 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
MT-ND3P03897 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
MT-ND3P03897 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.85■■□□□ 1.25
MT-ND3P03897 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.85■■□□□ 1.25
MT-ND3P03897 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
MT-ND3P03897 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MT-ND3P03897 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
MT-ND3P03897 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MT-ND3P03897 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
MT-ND3P03897 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
MT-ND3P03897 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
MT-ND3P03897 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
MT-ND3P03897 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
MT-ND3P03897 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.84■■□□□ 1.25
MT-ND3P03897 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.84■■□□□ 1.25
MT-ND3P03897 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
MT-ND3P03897 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
MT-ND3P03897 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
MT-ND3P03897 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.83■■□□□ 1.25
MT-ND3P03897 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
MT-ND3P03897 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
MT-ND3P03897 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.83■■□□□ 1.25
MT-ND3P03897 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
MT-ND3P03897 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.83■■□□□ 1.25
MT-ND3P03897 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.83■■□□□ 1.25
MT-ND3P03897 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.83■■□□□ 1.25
MT-ND3P03897 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.83■■□□□ 1.25
MT-ND3P03897 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.83■■□□□ 1.25
MT-ND3P03897 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
MT-ND3P03897 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.83■■□□□ 1.25
MT-ND3P03897 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.24
MT-ND3P03897 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.83■■□□□ 1.24
MT-ND3P03897 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.83■■□□□ 1.24
MT-ND3P03897 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
MT-ND3P03897 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
MT-ND3P03897 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
MT-ND3P03897 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
MT-ND3P03897 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms