Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SOD1P00441 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SOD1P00441 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
SOD1P00441 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SOD1P00441 AC096631.2-201ENST00000436136 790 ntBASIC22.38■■□□□ 1.17
SOD1P00441 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.38■■□□□ 1.17
SOD1P00441 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SOD1P00441 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.38■■□□□ 1.17
SOD1P00441 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.38■■□□□ 1.17
SOD1P00441 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SOD1P00441 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
SOD1P00441 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
SOD1P00441 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SOD1P00441 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SOD1P00441 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.37■■□□□ 1.17
SOD1P00441 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SOD1P00441 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
SOD1P00441 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SOD1P00441 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.37■■□□□ 1.17
SOD1P00441 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SOD1P00441 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SOD1P00441 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
SOD1P00441 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.36■■□□□ 1.17
SOD1P00441 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.36■■□□□ 1.17
SOD1P00441 AC099791.2-201ENST00000605725 427 ntBASIC22.36■■□□□ 1.17
SOD1P00441 AL139246.5-201ENST00000606645 996 ntBASIC22.36■■□□□ 1.17
SOD1P00441 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
SOD1P00441 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SOD1P00441 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SOD1P00441 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SOD1P00441 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SOD1P00441 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.35■■□□□ 1.17
SOD1P00441 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.35■■□□□ 1.17
SOD1P00441 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SOD1P00441 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SOD1P00441 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SOD1P00441 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
SOD1P00441 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SOD1P00441 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
SOD1P00441 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SOD1P00441 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.34■■□□□ 1.17
SOD1P00441 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.34■■□□□ 1.17
SOD1P00441 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SOD1P00441 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SOD1P00441 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SOD1P00441 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SOD1P00441 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SOD1P00441 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SOD1P00441 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.33■■□□□ 1.17
SOD1P00441 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SOD1P00441 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SOD1P00441 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SOD1P00441 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
SOD1P00441 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.32■■□□□ 1.16
SOD1P00441 UNC93B3-201ENST00000308076 687 ntBASIC22.32■■□□□ 1.16
SOD1P00441 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.32■■□□□ 1.16
SOD1P00441 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SOD1P00441 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
SOD1P00441 AC006455.2-201ENST00000429931 906 ntBASIC22.32■■□□□ 1.16
SOD1P00441 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SOD1P00441 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
SOD1P00441 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.32■■□□□ 1.16
SOD1P00441 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SOD1P00441 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SOD1P00441 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SOD1P00441 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SOD1P00441 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SOD1P00441 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.31■■□□□ 1.16
SOD1P00441 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SOD1P00441 MIR638-201ENST00000385237 100 ntBASIC22.31■■□□□ 1.16
SOD1P00441 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SOD1P00441 AC093323.1-202ENST00000635031 2045 ntBASIC22.31■■□□□ 1.16
SOD1P00441 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SOD1P00441 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SOD1P00441 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SOD1P00441 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SOD1P00441 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.31■■□□□ 1.16
SOD1P00441 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.3■■□□□ 1.16
SOD1P00441 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SOD1P00441 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SOD1P00441 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SOD1P00441 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SOD1P00441 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SOD1P00441 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
SOD1P00441 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
SOD1P00441 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SOD1P00441 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SOD1P00441 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.29■■□□□ 1.16
SOD1P00441 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.29■■□□□ 1.16
SOD1P00441 AC241377.3-202ENST00000626088 1088 ntBASIC22.29■■□□□ 1.16
SOD1P00441 AC241585.3-202ENST00000628937 1088 ntBASIC22.29■■□□□ 1.16
SOD1P00441 AC245100.8-202ENST00000629247 1058 ntBASIC22.29■■□□□ 1.16
SOD1P00441 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
SOD1P00441 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SOD1P00441 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SOD1P00441 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.29■■□□□ 1.16
SOD1P00441 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SOD1P00441 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SOD1P00441 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SOD1P00441 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms