Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.87■□□□□ 0.61
ABCA1O95477 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCA1O95477 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ABCA1O95477 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
ABCA1O95477 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.86■□□□□ 0.61
ABCA1O95477 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCA1O95477 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCA1O95477 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ABCA1O95477 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCA1O95477 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
ABCA1O95477 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.86■□□□□ 0.61
ABCA1O95477 ID1-201ENST00000376105 1233 ntBASIC18.86■□□□□ 0.61
ABCA1O95477 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.86■□□□□ 0.61
ABCA1O95477 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.86■□□□□ 0.61
ABCA1O95477 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.86■□□□□ 0.61
ABCA1O95477 AC022211.4-201ENST00000625094 2161 ntBASIC18.86■□□□□ 0.61
ABCA1O95477 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ABCA1O95477 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCA1O95477 AC145676.1-201ENST00000514988 2004 ntBASIC18.85■□□□□ 0.61
ABCA1O95477 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.85■□□□□ 0.61
ABCA1O95477 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ABCA1O95477 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.85■□□□□ 0.61
ABCA1O95477 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ABCA1O95477 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.85■□□□□ 0.61
ABCA1O95477 AC136469.2-201ENST00000623944 1028 ntBASIC18.85■□□□□ 0.61
ABCA1O95477 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.85■□□□□ 0.61
ABCA1O95477 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCA1O95477 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.85■□□□□ 0.61
ABCA1O95477 SLC6A10P-202ENST00000431994 2058 ntBASIC18.85■□□□□ 0.61
ABCA1O95477 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ABCA1O95477 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ABCA1O95477 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.85■□□□□ 0.61
ABCA1O95477 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.85■□□□□ 0.61
ABCA1O95477 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA1O95477 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.84■□□□□ 0.61
ABCA1O95477 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ABCA1O95477 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.84■□□□□ 0.61
ABCA1O95477 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA1O95477 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ABCA1O95477 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA1O95477 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
ABCA1O95477 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA1O95477 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA1O95477 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ABCA1O95477 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
ABCA1O95477 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ABCA1O95477 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ABCA1O95477 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ABCA1O95477 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ABCA1O95477 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ABCA1O95477 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ABCA1O95477 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ABCA1O95477 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.83■□□□□ 0.6
ABCA1O95477 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ABCA1O95477 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ABCA1O95477 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.83■□□□□ 0.6
ABCA1O95477 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.83■□□□□ 0.6
ABCA1O95477 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.83■□□□□ 0.6
ABCA1O95477 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA1O95477 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.82■□□□□ 0.6
ABCA1O95477 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA1O95477 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA1O95477 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ABCA1O95477 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ABCA1O95477 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA1O95477 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ABCA1O95477 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.82■□□□□ 0.6
ABCA1O95477 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA1O95477 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ABCA1O95477 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA1O95477 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA1O95477 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA1O95477 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ABCA1O95477 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ABCA1O95477 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.81■□□□□ 0.6
ABCA1O95477 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA1O95477 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.81■□□□□ 0.6
ABCA1O95477 SLC47A1P1-202ENST00000449666 945 ntBASIC18.81■□□□□ 0.6
ABCA1O95477 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.81■□□□□ 0.6
ABCA1O95477 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.81■□□□□ 0.6
ABCA1O95477 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.81■□□□□ 0.6
ABCA1O95477 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA1O95477 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA1O95477 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA1O95477 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA1O95477 KRT18P5-201ENST00000436075 1291 ntBASIC18.81■□□□□ 0.6
ABCA1O95477 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA1O95477 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ABCA1O95477 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ABCA1O95477 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ABCA1O95477 YBX1P1-201ENST00000445822 960 ntBASIC18.8■□□□□ 0.6
ABCA1O95477 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.8■□□□□ 0.6
ABCA1O95477 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.8■□□□□ 0.6
ABCA1O95477 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ABCA1O95477 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.8■□□□□ 0.6
ABCA1O95477 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.8■□□□□ 0.6
ABCA1O95477 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ABCA1O95477 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.79■□□□□ 0.6
ABCA1O95477 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ABCA1O95477 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms