Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM3O75382 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM3O75382 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM3O75382 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM3O75382 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.93■□□□□ 0.94
TRIM3O75382 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM3O75382 AL356740.2-201ENST00000601559 647 ntBASIC20.93■□□□□ 0.94
TRIM3O75382 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM3O75382 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM3O75382 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM3O75382 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM3O75382 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM3O75382 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM3O75382 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.92■□□□□ 0.94
TRIM3O75382 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.92■□□□□ 0.94
TRIM3O75382 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TRIM3O75382 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM3O75382 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.92■□□□□ 0.94
TRIM3O75382 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM3O75382 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TRIM3O75382 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TRIM3O75382 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
TRIM3O75382 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM3O75382 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TRIM3O75382 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRIM3O75382 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.92■□□□□ 0.94
TRIM3O75382 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM3O75382 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM3O75382 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.91■□□□□ 0.94
TRIM3O75382 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
TRIM3O75382 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM3O75382 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM3O75382 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.91■□□□□ 0.94
TRIM3O75382 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.91■□□□□ 0.94
TRIM3O75382 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.91■□□□□ 0.94
TRIM3O75382 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRIM3O75382 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM3O75382 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM3O75382 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRIM3O75382 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM3O75382 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM3O75382 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM3O75382 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM3O75382 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM3O75382 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM3O75382 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM3O75382 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM3O75382 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM3O75382 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM3O75382 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM3O75382 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM3O75382 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM3O75382 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.89■□□□□ 0.93
TRIM3O75382 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.89■□□□□ 0.93
TRIM3O75382 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM3O75382 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM3O75382 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM3O75382 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM3O75382 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM3O75382 AC008406.3-201ENST00000620001 1374 ntBASIC20.88■□□□□ 0.93
TRIM3O75382 AC005703.6-201ENST00000623265 1329 ntBASIC20.88■□□□□ 0.93
TRIM3O75382 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM3O75382 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM3O75382 AC131281.2-201ENST00000520478 145 ntBASIC20.88■□□□□ 0.93
TRIM3O75382 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM3O75382 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM3O75382 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM3O75382 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM3O75382 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM3O75382 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM3O75382 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM3O75382 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM3O75382 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.87■□□□□ 0.93
TRIM3O75382 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM3O75382 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TRIM3O75382 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM3O75382 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TRIM3O75382 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM3O75382 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM3O75382 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM3O75382 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM3O75382 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM3O75382 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TRIM3O75382 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM3O75382 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM3O75382 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM3O75382 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.86■□□□□ 0.93
TRIM3O75382 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM3O75382 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM3O75382 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM3O75382 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM3O75382 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM3O75382 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM3O75382 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM3O75382 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM3O75382 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM3O75382 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM3O75382 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM3O75382 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM3O75382 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms