Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CPNE3O75131 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CPNE3O75131 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.58■■□□□ 1.05
CPNE3O75131 AL355001.2-201ENST00000620617 1191 ntBASIC21.58■■□□□ 1.05
CPNE3O75131 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.58■■□□□ 1.04
CPNE3O75131 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPNE3O75131 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.58■■□□□ 1.04
CPNE3O75131 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE3O75131 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CPNE3O75131 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.57■■□□□ 1.04
CPNE3O75131 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE3O75131 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE3O75131 AL031432.3-201ENST00000607698 485 ntBASIC21.57■■□□□ 1.04
CPNE3O75131 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE3O75131 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CPNE3O75131 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CPNE3O75131 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CPNE3O75131 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPNE3O75131 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CPNE3O75131 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE3O75131 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE3O75131 AC099791.2-201ENST00000605725 427 ntBASIC21.56■■□□□ 1.04
CPNE3O75131 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.56■■□□□ 1.04
CPNE3O75131 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPNE3O75131 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE3O75131 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
CPNE3O75131 AC133561.1-201ENST00000568600 2415 ntBASIC21.55■■□□□ 1.04
CPNE3O75131 SUDS3P1-201ENST00000505831 966 ntBASIC21.55■■□□□ 1.04
CPNE3O75131 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.55■■□□□ 1.04
CPNE3O75131 AP003733.4-201ENST00000623785 1697 ntBASIC21.55■■□□□ 1.04
CPNE3O75131 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.55■■□□□ 1.04
CPNE3O75131 AC022211.4-201ENST00000625094 2161 ntBASIC21.55■■□□□ 1.04
CPNE3O75131 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE3O75131 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPNE3O75131 C17orf82-201ENST00000623772 1530 ntBASIC21.55■■□□□ 1.04
CPNE3O75131 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE3O75131 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE3O75131 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE3O75131 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE3O75131 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE3O75131 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.54■■□□□ 1.04
CPNE3O75131 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CPNE3O75131 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
CPNE3O75131 AC241377.3-202ENST00000626088 1088 ntBASIC21.54■■□□□ 1.04
CPNE3O75131 AC241585.3-202ENST00000628937 1088 ntBASIC21.54■■□□□ 1.04
CPNE3O75131 AC245100.8-202ENST00000629247 1058 ntBASIC21.54■■□□□ 1.04
CPNE3O75131 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CPNE3O75131 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE3O75131 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE3O75131 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE3O75131 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE3O75131 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.54■■□□□ 1.04
CPNE3O75131 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE3O75131 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPNE3O75131 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.53■■□□□ 1.04
CPNE3O75131 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CPNE3O75131 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CPNE3O75131 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE3O75131 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.53■■□□□ 1.04
CPNE3O75131 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.53■■□□□ 1.04
CPNE3O75131 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CPNE3O75131 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE3O75131 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE3O75131 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPNE3O75131 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.53■■□□□ 1.04
CPNE3O75131 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CPNE3O75131 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.52■■□□□ 1.04
CPNE3O75131 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE3O75131 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE3O75131 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE3O75131 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE3O75131 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE3O75131 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.52■■□□□ 1.04
CPNE3O75131 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE3O75131 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.52■■□□□ 1.04
CPNE3O75131 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE3O75131 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE3O75131 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.52■■□□□ 1.04
CPNE3O75131 SERBP1P1-201ENST00000396021 1160 ntBASIC21.52■■□□□ 1.04
CPNE3O75131 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE3O75131 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.52■■□□□ 1.04
CPNE3O75131 AL138724.1-201ENST00000606771 1088 ntBASIC21.52■■□□□ 1.04
CPNE3O75131 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.52■■□□□ 1.04
CPNE3O75131 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPNE3O75131 ALDH1A3-203ENST00000557963 1670 ntBASIC21.52■■□□□ 1.04
CPNE3O75131 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.52■■□□□ 1.04
CPNE3O75131 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE3O75131 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.51■■□□□ 1.03
CPNE3O75131 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CPNE3O75131 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE3O75131 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE3O75131 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.51■■□□□ 1.03
CPNE3O75131 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.51■■□□□ 1.03
CPNE3O75131 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CPNE3O75131 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPNE3O75131 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.51■■□□□ 1.03
CPNE3O75131 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.5■■□□□ 1.03
CPNE3O75131 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CPNE3O75131 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPNE3O75131 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms