Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
PTCD1O75127 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC29.24■■■□□ 2.27
PTCD1O75127 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC29.24■■■□□ 2.27
PTCD1O75127 AL161729.1-201ENST00000604104 1402 ntBASIC29.24■■■□□ 2.27
PTCD1O75127 AC135731.1-201ENST00000569415 2548 ntBASIC29.24■■■□□ 2.27
PTCD1O75127 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PTCD1O75127 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PTCD1O75127 AK1-201ENST00000223836 736 ntTSL 3 BASIC29.23■■■□□ 2.27
PTCD1O75127 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
PTCD1O75127 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
PTCD1O75127 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PTCD1O75127 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PTCD1O75127 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC29.22■■■□□ 2.27
PTCD1O75127 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
PTCD1O75127 AL031602.1-201ENST00000633169 911 ntBASIC29.22■■■□□ 2.27
PTCD1O75127 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PTCD1O75127 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
PTCD1O75127 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC29.21■■■□□ 2.27
PTCD1O75127 HACD1-201ENST00000326961 773 ntTSL 2 BASIC29.21■■■□□ 2.27
PTCD1O75127 SLC47A1P1-202ENST00000449666 945 ntBASIC29.21■■■□□ 2.27
PTCD1O75127 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
PTCD1O75127 TSPY26P-201ENST00000476365 1326 ntBASIC29.2■■■□□ 2.27
PTCD1O75127 EI24-204ENST00000527235 1625 ntTSL 5 BASIC29.2■■■□□ 2.27
PTCD1O75127 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC29.2■■■□□ 2.27
PTCD1O75127 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
PTCD1O75127 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC29.2■■■□□ 2.26
PTCD1O75127 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
PTCD1O75127 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
PTCD1O75127 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC29.2■■■□□ 2.26
PTCD1O75127 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC29.2■■■□□ 2.26
PTCD1O75127 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC29.2■■■□□ 2.26
PTCD1O75127 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC29.19■■■□□ 2.26
PTCD1O75127 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC29.19■■■□□ 2.26
PTCD1O75127 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PTCD1O75127 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC29.18■■■□□ 2.26
PTCD1O75127 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC29.18■■■□□ 2.26
PTCD1O75127 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PTCD1O75127 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC29.18■■■□□ 2.26
PTCD1O75127 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PTCD1O75127 ASB1-202ENST00000409297 878 ntTSL 5 BASIC29.18■■■□□ 2.26
PTCD1O75127 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC29.18■■■□□ 2.26
PTCD1O75127 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC29.18■■■□□ 2.26
PTCD1O75127 IKBKGP1-201ENST00000612193 1073 ntBASIC29.18■■■□□ 2.26
PTCD1O75127 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
PTCD1O75127 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC29.18■■■□□ 2.26
PTCD1O75127 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
PTCD1O75127 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC29.18■■■□□ 2.26
PTCD1O75127 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC29.18■■■□□ 2.26
PTCD1O75127 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC29.17■■■□□ 2.26
PTCD1O75127 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC29.17■■■□□ 2.26
PTCD1O75127 AC034268.1-201ENST00000441047 882 ntBASIC29.17■■■□□ 2.26
PTCD1O75127 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC29.17■■■□□ 2.26
PTCD1O75127 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC29.17■■■□□ 2.26
PTCD1O75127 AC141586.4-201ENST00000624558 1573 ntBASIC29.17■■■□□ 2.26
PTCD1O75127 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
PTCD1O75127 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
PTCD1O75127 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC29.16■■■□□ 2.26
PTCD1O75127 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
PTCD1O75127 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC29.16■■■□□ 2.26
PTCD1O75127 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
PTCD1O75127 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
PTCD1O75127 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC29.16■■■□□ 2.26
PTCD1O75127 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.16■■■□□ 2.26
PTCD1O75127 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC29.16■■■□□ 2.26
PTCD1O75127 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
PTCD1O75127 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC29.15■■■□□ 2.26
PTCD1O75127 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
PTCD1O75127 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
PTCD1O75127 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
PTCD1O75127 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
PTCD1O75127 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC29.15■■■□□ 2.26
PTCD1O75127 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC29.15■■■□□ 2.26
PTCD1O75127 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
PTCD1O75127 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
PTCD1O75127 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
PTCD1O75127 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
PTCD1O75127 NME4-202ENST00000382940 766 ntTSL 3 BASIC29.14■■■□□ 2.26
PTCD1O75127 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC29.14■■■□□ 2.26
PTCD1O75127 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC29.14■■■□□ 2.26
PTCD1O75127 NME4-211ENST00000620944 1193 ntTSL 2 BASIC29.14■■■□□ 2.26
PTCD1O75127 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
PTCD1O75127 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC29.14■■■□□ 2.25
PTCD1O75127 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
PTCD1O75127 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PTCD1O75127 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PTCD1O75127 TMEM202-AS1-202ENST00000565181 2325 ntBASIC29.13■■■□□ 2.25
PTCD1O75127 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
PTCD1O75127 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
PTCD1O75127 YBX1P1-201ENST00000445822 960 ntBASIC29.13■■■□□ 2.25
PTCD1O75127 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC29.13■■■□□ 2.25
PTCD1O75127 AC022517.1-201ENST00000592429 346 ntBASIC29.13■■■□□ 2.25
PTCD1O75127 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC29.13■■■□□ 2.25
PTCD1O75127 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC29.13■■■□□ 2.25
PTCD1O75127 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
PTCD1O75127 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC29.12■■■□□ 2.25
PTCD1O75127 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC29.12■■■□□ 2.25
PTCD1O75127 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC29.12■■■□□ 2.25
PTCD1O75127 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
PTCD1O75127 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC29.12■■■□□ 2.25
PTCD1O75127 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms