Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
GMDSO60547 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.85■□□□□ 0.77
GMDSO60547 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.85■□□□□ 0.77
GMDSO60547 THA1P-201ENST00000590384 1145 ntBASIC19.85■□□□□ 0.77
GMDSO60547 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.85■□□□□ 0.77
GMDSO60547 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.85■□□□□ 0.77
GMDSO60547 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GMDSO60547 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
GMDSO60547 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
GMDSO60547 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
GMDSO60547 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
GMDSO60547 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
GMDSO60547 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GMDSO60547 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GMDSO60547 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
GMDSO60547 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GMDSO60547 AC103834.1-201ENST00000520383 144 ntBASIC19.84■□□□□ 0.77
GMDSO60547 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GMDSO60547 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.84■□□□□ 0.77
GMDSO60547 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GMDSO60547 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
GMDSO60547 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GMDSO60547 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
GMDSO60547 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
GMDSO60547 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GMDSO60547 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GMDSO60547 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GMDSO60547 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GMDSO60547 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GMDSO60547 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
GMDSO60547 AC120024.1-201ENST00000562672 995 ntBASIC19.83■□□□□ 0.77
GMDSO60547 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GMDSO60547 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.83■□□□□ 0.76
GMDSO60547 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
GMDSO60547 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GMDSO60547 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GMDSO60547 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GMDSO60547 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GMDSO60547 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GMDSO60547 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GMDSO60547 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GMDSO60547 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.82■□□□□ 0.76
GMDSO60547 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.82■□□□□ 0.76
GMDSO60547 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.82■□□□□ 0.76
GMDSO60547 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.82■□□□□ 0.76
GMDSO60547 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.82■□□□□ 0.76
GMDSO60547 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
GMDSO60547 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GMDSO60547 KRT8P33-201ENST00000508125 1423 ntBASIC19.82■□□□□ 0.76
GMDSO60547 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GMDSO60547 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
GMDSO60547 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
GMDSO60547 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GMDSO60547 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GMDSO60547 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GMDSO60547 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
GMDSO60547 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GMDSO60547 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GMDSO60547 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GMDSO60547 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GMDSO60547 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
GMDSO60547 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GMDSO60547 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.8■□□□□ 0.76
GMDSO60547 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GMDSO60547 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GMDSO60547 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GMDSO60547 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GMDSO60547 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GMDSO60547 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GMDSO60547 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GMDSO60547 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.79■□□□□ 0.76
GMDSO60547 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GMDSO60547 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GMDSO60547 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GMDSO60547 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.79■□□□□ 0.76
GMDSO60547 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GMDSO60547 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GMDSO60547 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GMDSO60547 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
GMDSO60547 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
GMDSO60547 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GMDSO60547 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
GMDSO60547 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.79■□□□□ 0.76
GMDSO60547 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.79■□□□□ 0.76
GMDSO60547 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
GMDSO60547 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GMDSO60547 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GMDSO60547 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.78■□□□□ 0.76
GMDSO60547 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GMDSO60547 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GMDSO60547 AC103724.3-201ENST00000564481 992 ntBASIC19.78■□□□□ 0.76
GMDSO60547 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
GMDSO60547 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
GMDSO60547 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.78■□□□□ 0.76
GMDSO60547 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GMDSO60547 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GMDSO60547 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.78■□□□□ 0.76
GMDSO60547 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GMDSO60547 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GMDSO60547 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms