Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 TSPY26P-201ENST00000476365 1326 ntBASIC30.77■■■□□ 2.52
PIK3C2AO00443 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PIK3C2AO00443 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PIK3C2AO00443 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PIK3C2AO00443 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
PIK3C2AO00443 ASB1-202ENST00000409297 878 ntTSL 5 BASIC30.77■■■□□ 2.52
PIK3C2AO00443 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC30.77■■■□□ 2.52
PIK3C2AO00443 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC30.77■■■□□ 2.52
PIK3C2AO00443 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PIK3C2AO00443 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
PIK3C2AO00443 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
PIK3C2AO00443 AC034268.1-201ENST00000441047 882 ntBASIC30.76■■■□□ 2.51
PIK3C2AO00443 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.51
PIK3C2AO00443 IKBKGP1-201ENST00000612193 1073 ntBASIC30.76■■■□□ 2.51
PIK3C2AO00443 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
PIK3C2AO00443 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC30.76■■■□□ 2.51
PIK3C2AO00443 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC30.76■■■□□ 2.51
PIK3C2AO00443 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC30.75■■■□□ 2.51
PIK3C2AO00443 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PIK3C2AO00443 DUX4L2-201ENST00000561772 1275 ntBASIC30.75■■■□□ 2.51
PIK3C2AO00443 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC30.75■■■□□ 2.51
PIK3C2AO00443 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC30.75■■■□□ 2.51
PIK3C2AO00443 DUX4L6-201ENST00000626483 1275 ntBASIC30.75■■■□□ 2.51
PIK3C2AO00443 DUX4L1-201ENST00000627662 1275 ntBASIC30.75■■■□□ 2.51
PIK3C2AO00443 DUX4L8-201ENST00000629013 1275 ntBASIC30.75■■■□□ 2.51
PIK3C2AO00443 DUX4L3-201ENST00000630187 1275 ntBASIC30.75■■■□□ 2.51
PIK3C2AO00443 DUX4L7-201ENST00000630678 1275 ntBASIC30.75■■■□□ 2.51
PIK3C2AO00443 DUX4L5-201ENST00000630834 1275 ntBASIC30.75■■■□□ 2.51
PIK3C2AO00443 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PIK3C2AO00443 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PIK3C2AO00443 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PIK3C2AO00443 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
PIK3C2AO00443 YBX1P1-201ENST00000445822 960 ntBASIC30.74■■■□□ 2.51
PIK3C2AO00443 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC30.74■■■□□ 2.51
PIK3C2AO00443 IGHV3-19-201ENST00000521488 291 ntBASIC30.74■■■□□ 2.51
PIK3C2AO00443 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC30.74■■■□□ 2.51
PIK3C2AO00443 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
PIK3C2AO00443 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC30.73■■■□□ 2.51
PIK3C2AO00443 AC012414.1-201ENST00000556676 535 ntBASIC30.73■■■□□ 2.51
PIK3C2AO00443 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
PIK3C2AO00443 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
PIK3C2AO00443 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PIK3C2AO00443 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
PIK3C2AO00443 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
PIK3C2AO00443 AC126544.1-201ENST00000580842 1059 ntBASIC30.72■■■□□ 2.51
PIK3C2AO00443 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC30.71■■■□□ 2.51
PIK3C2AO00443 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
PIK3C2AO00443 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC30.71■■■□□ 2.51
PIK3C2AO00443 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PIK3C2AO00443 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PIK3C2AO00443 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
PIK3C2AO00443 AC141586.4-201ENST00000624558 1573 ntBASIC30.7■■■□□ 2.5
PIK3C2AO00443 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC30.7■■■□□ 2.5
PIK3C2AO00443 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC30.7■■■□□ 2.5
PIK3C2AO00443 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
PIK3C2AO00443 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
PIK3C2AO00443 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
PIK3C2AO00443 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
PIK3C2AO00443 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PIK3C2AO00443 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC30.69■■■□□ 2.5
PIK3C2AO00443 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC30.69■■■□□ 2.5
PIK3C2AO00443 AC092437.1-201ENST00000624794 1048 ntBASIC30.69■■■□□ 2.5
PIK3C2AO00443 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
PIK3C2AO00443 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
PIK3C2AO00443 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PIK3C2AO00443 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC30.68■■■□□ 2.5
PIK3C2AO00443 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC30.68■■■□□ 2.5
PIK3C2AO00443 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC30.68■■■□□ 2.5
PIK3C2AO00443 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PIK3C2AO00443 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PIK3C2AO00443 AICDA-202ENST00000537228 667 ntTSL 5 BASIC30.68■■■□□ 2.5
PIK3C2AO00443 RAB43-208ENST00000615093 783 ntTSL 5 BASIC30.68■■■□□ 2.5
PIK3C2AO00443 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
PIK3C2AO00443 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC30.68■■■□□ 2.5
PIK3C2AO00443 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PIK3C2AO00443 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
PIK3C2AO00443 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC30.67■■■□□ 2.5
PIK3C2AO00443 GLI3-203ENST00000437480 451 ntTSL 2 BASIC30.67■■■□□ 2.5
PIK3C2AO00443 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PIK3C2AO00443 AC010525.1-201ENST00000585559 441 ntBASIC30.67■■■□□ 2.5
PIK3C2AO00443 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC30.66■■■□□ 2.5
PIK3C2AO00443 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC30.66■■■□□ 2.5
PIK3C2AO00443 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PIK3C2AO00443 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
PIK3C2AO00443 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC30.65■■■□□ 2.5
PIK3C2AO00443 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
PIK3C2AO00443 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
PIK3C2AO00443 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PIK3C2AO00443 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC30.65■■■□□ 2.5
PIK3C2AO00443 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
PIK3C2AO00443 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PIK3C2AO00443 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PIK3C2AO00443 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC30.65■■■□□ 2.5
PIK3C2AO00443 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
PIK3C2AO00443 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PIK3C2AO00443 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
PIK3C2AO00443 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC30.64■■■□□ 2.5
PIK3C2AO00443 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PIK3C2AO00443 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC30.64■■■□□ 2.5
PIK3C2AO00443 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC30.64■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms