Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
UPK1AO00322 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
UPK1AO00322 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
UPK1AO00322 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
UPK1AO00322 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPK1AO00322 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.45■■□□□ 1.02
UPK1AO00322 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.45■■□□□ 1.02
UPK1AO00322 AL031848.2-201ENST00000607670 837 ntBASIC21.45■■□□□ 1.02
UPK1AO00322 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.45■■□□□ 1.02
UPK1AO00322 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.45■■□□□ 1.02
UPK1AO00322 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
UPK1AO00322 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UPK1AO00322 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.44■■□□□ 1.02
UPK1AO00322 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.44■■□□□ 1.02
UPK1AO00322 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPK1AO00322 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPK1AO00322 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UPK1AO00322 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UPK1AO00322 ANOS2P-203ENST00000472227 1816 ntBASIC21.43■■□□□ 1.02
UPK1AO00322 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
UPK1AO00322 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
UPK1AO00322 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UPK1AO00322 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UPK1AO00322 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.43■■□□□ 1.02
UPK1AO00322 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.43■■□□□ 1.02
UPK1AO00322 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UPK1AO00322 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
UPK1AO00322 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
UPK1AO00322 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
UPK1AO00322 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UPK1AO00322 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.42■■□□□ 1.02
UPK1AO00322 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
UPK1AO00322 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.42■■□□□ 1.02
UPK1AO00322 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.42■■□□□ 1.02
UPK1AO00322 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.42■■□□□ 1.02
UPK1AO00322 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK1AO00322 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UPK1AO00322 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK1AO00322 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK1AO00322 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK1AO00322 DUSP8P3-201ENST00000399571 1760 ntBASIC21.41■■□□□ 1.02
UPK1AO00322 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UPK1AO00322 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UPK1AO00322 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
UPK1AO00322 C1orf229-201ENST00000623686 2258 ntBASIC21.41■■□□□ 1.02
UPK1AO00322 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UPK1AO00322 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.4■■□□□ 1.02
UPK1AO00322 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.4■■□□□ 1.02
UPK1AO00322 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.4■■□□□ 1.02
UPK1AO00322 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
UPK1AO00322 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.4■■□□□ 1.02
UPK1AO00322 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPK1AO00322 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UPK1AO00322 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
UPK1AO00322 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
UPK1AO00322 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
UPK1AO00322 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
UPK1AO00322 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.39■■□□□ 1.01
UPK1AO00322 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
UPK1AO00322 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.39■■□□□ 1.01
UPK1AO00322 RARRES2P1-201ENST00000474487 481 ntBASIC21.39■■□□□ 1.01
UPK1AO00322 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.39■■□□□ 1.01
UPK1AO00322 AC137630.3-201ENST00000607245 391 ntBASIC21.39■■□□□ 1.01
UPK1AO00322 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.39■■□□□ 1.01
UPK1AO00322 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.39■■□□□ 1.01
UPK1AO00322 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPK1AO00322 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UPK1AO00322 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.38■■□□□ 1.01
UPK1AO00322 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UPK1AO00322 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
UPK1AO00322 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPK1AO00322 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UPK1AO00322 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
UPK1AO00322 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
UPK1AO00322 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.38■■□□□ 1.01
UPK1AO00322 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.38■■□□□ 1.01
UPK1AO00322 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.37■■□□□ 1.01
UPK1AO00322 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.37■■□□□ 1.01
UPK1AO00322 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.37■■□□□ 1.01
UPK1AO00322 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
UPK1AO00322 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPK1AO00322 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPK1AO00322 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
UPK1AO00322 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UPK1AO00322 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UPK1AO00322 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.37■■□□□ 1.01
UPK1AO00322 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.37■■□□□ 1.01
UPK1AO00322 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UPK1AO00322 AC092068.2-201ENST00000590491 1708 ntBASIC21.37■■□□□ 1.01
UPK1AO00322 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UPK1AO00322 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPK1AO00322 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
UPK1AO00322 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
UPK1AO00322 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPK1AO00322 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.36■■□□□ 1.01
UPK1AO00322 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UPK1AO00322 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPK1AO00322 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UPK1AO00322 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UPK1AO00322 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms