Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.11■□□□□ 0.17
LYRM9A8MSI8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.11■□□□□ 0.17
LYRM9A8MSI8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYRM9A8MSI8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYRM9A8MSI8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYRM9A8MSI8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYRM9A8MSI8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYRM9A8MSI8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYRM9A8MSI8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LYRM9A8MSI8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.11■□□□□ 0.17
LYRM9A8MSI8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYRM9A8MSI8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LYRM9A8MSI8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC16.11■□□□□ 0.17
LYRM9A8MSI8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYRM9A8MSI8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYRM9A8MSI8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LYRM9A8MSI8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LYRM9A8MSI8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYRM9A8MSI8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.1■□□□□ 0.17
LYRM9A8MSI8 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYRM9A8MSI8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.1■□□□□ 0.17
LYRM9A8MSI8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC16.1■□□□□ 0.17
LYRM9A8MSI8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.1■□□□□ 0.17
LYRM9A8MSI8 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYRM9A8MSI8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LYRM9A8MSI8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYRM9A8MSI8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYRM9A8MSI8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LYRM9A8MSI8 AC009102.2-201ENST00000606772 1639 ntBASIC16.09■□□□□ 0.17
LYRM9A8MSI8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYRM9A8MSI8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYRM9A8MSI8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.09■□□□□ 0.17
LYRM9A8MSI8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.09■□□□□ 0.17
LYRM9A8MSI8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.09■□□□□ 0.17
LYRM9A8MSI8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LYRM9A8MSI8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYRM9A8MSI8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYRM9A8MSI8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LYRM9A8MSI8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LYRM9A8MSI8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LYRM9A8MSI8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.08■□□□□ 0.17
LYRM9A8MSI8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.08■□□□□ 0.17
LYRM9A8MSI8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LYRM9A8MSI8 SRD5A1P1-201ENST00000442297 786 ntBASIC16.08■□□□□ 0.16
LYRM9A8MSI8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LYRM9A8MSI8 AC092171.4-201ENST00000609130 632 ntBASIC16.08■□□□□ 0.16
LYRM9A8MSI8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LYRM9A8MSI8 AC008406.3-201ENST00000620001 1374 ntBASIC16.08■□□□□ 0.16
LYRM9A8MSI8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LYRM9A8MSI8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LYRM9A8MSI8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LYRM9A8MSI8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
LYRM9A8MSI8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYRM9A8MSI8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.07■□□□□ 0.16
LYRM9A8MSI8 AC131281.2-201ENST00000520478 145 ntBASIC16.07■□□□□ 0.16
LYRM9A8MSI8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LYRM9A8MSI8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
LYRM9A8MSI8 AL512631.2-201ENST00000604634 923 ntBASIC16.07■□□□□ 0.16
LYRM9A8MSI8 AC241377.3-202ENST00000626088 1088 ntBASIC16.07■□□□□ 0.16
LYRM9A8MSI8 AC241585.3-202ENST00000628937 1088 ntBASIC16.07■□□□□ 0.16
LYRM9A8MSI8 AC245100.8-202ENST00000629247 1058 ntBASIC16.07■□□□□ 0.16
LYRM9A8MSI8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYRM9A8MSI8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYRM9A8MSI8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.07■□□□□ 0.16
LYRM9A8MSI8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYRM9A8MSI8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYRM9A8MSI8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LYRM9A8MSI8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
LYRM9A8MSI8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LYRM9A8MSI8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYRM9A8MSI8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYRM9A8MSI8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYRM9A8MSI8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYRM9A8MSI8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYRM9A8MSI8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LYRM9A8MSI8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LYRM9A8MSI8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.06■□□□□ 0.16
LYRM9A8MSI8 C17orf82-201ENST00000623772 1530 ntBASIC16.06■□□□□ 0.16
LYRM9A8MSI8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.06■□□□□ 0.16
LYRM9A8MSI8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYRM9A8MSI8 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYRM9A8MSI8 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYRM9A8MSI8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.06■□□□□ 0.16
LYRM9A8MSI8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.06■□□□□ 0.16
LYRM9A8MSI8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LYRM9A8MSI8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LYRM9A8MSI8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC16.05■□□□□ 0.16
LYRM9A8MSI8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYRM9A8MSI8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LYRM9A8MSI8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYRM9A8MSI8 FP325331.1-202ENST00000623531 1380 ntBASIC16.05■□□□□ 0.16
LYRM9A8MSI8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYRM9A8MSI8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.05■□□□□ 0.16
LYRM9A8MSI8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYRM9A8MSI8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LYRM9A8MSI8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LYRM9A8MSI8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LYRM9A8MSI8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LYRM9A8MSI8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LYRM9A8MSI8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms