Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CNOT1A5YKK6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.93■■□□□ 1.1
CNOT1A5YKK6 ERN1-208ENST00000606895 2068 ntBASIC21.93■■□□□ 1.1
CNOT1A5YKK6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.92■■□□□ 1.1
CNOT1A5YKK6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.92■■□□□ 1.1
CNOT1A5YKK6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.92■■□□□ 1.1
CNOT1A5YKK6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
CNOT1A5YKK6 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.92■■□□□ 1.1
CNOT1A5YKK6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.92■■□□□ 1.1
CNOT1A5YKK6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNOT1A5YKK6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.92■■□□□ 1.1
CNOT1A5YKK6 GPX1P1-201ENST00000388829 606 ntBASIC21.92■■□□□ 1.1
CNOT1A5YKK6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.92■■□□□ 1.1
CNOT1A5YKK6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CNOT1A5YKK6 AC008687.6-201ENST00000596318 630 ntBASIC21.92■■□□□ 1.1
CNOT1A5YKK6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.92■■□□□ 1.1
CNOT1A5YKK6 AC009086.3-201ENST00000623486 1008 ntBASIC21.92■■□□□ 1.1
CNOT1A5YKK6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.92■■□□□ 1.1
CNOT1A5YKK6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CNOT1A5YKK6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNOT1A5YKK6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CNOT1A5YKK6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.91■■□□□ 1.1
CNOT1A5YKK6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CNOT1A5YKK6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.91■■□□□ 1.1
CNOT1A5YKK6 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CNOT1A5YKK6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CNOT1A5YKK6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CNOT1A5YKK6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNOT1A5YKK6 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
CNOT1A5YKK6 AP005435.1-201ENST00000529293 1178 ntBASIC21.9■■□□□ 1.1
CNOT1A5YKK6 AL499627.2-201ENST00000606283 725 ntBASIC21.9■■□□□ 1.1
CNOT1A5YKK6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CNOT1A5YKK6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNOT1A5YKK6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNOT1A5YKK6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNOT1A5YKK6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CNOT1A5YKK6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
CNOT1A5YKK6 pRNA.6-201ENST00000610482 90 ntBASIC21.89■■□□□ 1.1
CNOT1A5YKK6 pRNA.5-201ENST00000612139 90 ntBASIC21.89■■□□□ 1.1
CNOT1A5YKK6 pRNA.11-201ENST00000618423 90 ntBASIC21.89■■□□□ 1.1
CNOT1A5YKK6 pRNA.13-201ENST00000619112 90 ntBASIC21.89■■□□□ 1.1
CNOT1A5YKK6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNOT1A5YKK6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.89■■□□□ 1.09
CNOT1A5YKK6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNOT1A5YKK6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CNOT1A5YKK6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.89■■□□□ 1.09
CNOT1A5YKK6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.89■■□□□ 1.09
CNOT1A5YKK6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.89■■□□□ 1.09
CNOT1A5YKK6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.88■■□□□ 1.09
CNOT1A5YKK6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.88■■□□□ 1.09
CNOT1A5YKK6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNOT1A5YKK6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.88■■□□□ 1.09
CNOT1A5YKK6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CNOT1A5YKK6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.88■■□□□ 1.09
CNOT1A5YKK6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.88■■□□□ 1.09
CNOT1A5YKK6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.88■■□□□ 1.09
CNOT1A5YKK6 MIR4651-201ENST00000582622 73 ntBASIC21.88■■□□□ 1.09
CNOT1A5YKK6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNOT1A5YKK6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.88■■□□□ 1.09
CNOT1A5YKK6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNOT1A5YKK6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CNOT1A5YKK6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.87■■□□□ 1.09
CNOT1A5YKK6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CNOT1A5YKK6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.87■■□□□ 1.09
CNOT1A5YKK6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.87■■□□□ 1.09
CNOT1A5YKK6 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CNOT1A5YKK6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.87■■□□□ 1.09
CNOT1A5YKK6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNOT1A5YKK6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CNOT1A5YKK6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CNOT1A5YKK6 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.86■■□□□ 1.09
CNOT1A5YKK6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.86■■□□□ 1.09
CNOT1A5YKK6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CNOT1A5YKK6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.86■■□□□ 1.09
CNOT1A5YKK6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CNOT1A5YKK6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.86■■□□□ 1.09
CNOT1A5YKK6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CNOT1A5YKK6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
CNOT1A5YKK6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CNOT1A5YKK6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CNOT1A5YKK6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CNOT1A5YKK6 AC004854.2-201ENST00000608450 1441 ntBASIC21.86■■□□□ 1.09
CNOT1A5YKK6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.85■■□□□ 1.09
CNOT1A5YKK6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CNOT1A5YKK6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CNOT1A5YKK6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.85■■□□□ 1.09
CNOT1A5YKK6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
CNOT1A5YKK6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
CNOT1A5YKK6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CNOT1A5YKK6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CNOT1A5YKK6 BID-214ENST00000617586 542 ntTSL 5 BASIC21.85■■□□□ 1.09
CNOT1A5YKK6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.85■■□□□ 1.09
CNOT1A5YKK6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CNOT1A5YKK6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CNOT1A5YKK6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNOT1A5YKK6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNOT1A5YKK6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CNOT1A5YKK6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.84■■□□□ 1.09
CNOT1A5YKK6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNOT1A5YKK6 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms