Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-8A0A0A6YYG3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-8A0A0A6YYG3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-8A0A0A6YYG3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-8A0A0A6YYG3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBV6-8A0A0A6YYG3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-8A0A0A6YYG3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRBV6-8A0A0A6YYG3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRBV6-8A0A0A6YYG3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC15.7■□□□□ 0.1
TRBV6-8A0A0A6YYG3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-8A0A0A6YYG3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV6-8A0A0A6YYG3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.69■□□□□ 0.1
TRBV6-8A0A0A6YYG3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-8A0A0A6YYG3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-8A0A0A6YYG3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
TRBV6-8A0A0A6YYG3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC15.69■□□□□ 0.1
TRBV6-8A0A0A6YYG3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-8A0A0A6YYG3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-8A0A0A6YYG3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-8A0A0A6YYG3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-8A0A0A6YYG3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-8A0A0A6YYG3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-8A0A0A6YYG3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRBV6-8A0A0A6YYG3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-8A0A0A6YYG3 KRT8P33-201ENST00000508125 1423 ntBASIC15.68■□□□□ 0.1
TRBV6-8A0A0A6YYG3 H19-210ENST00000439725 1929 ntTSL 2 BASIC15.68■□□□□ 0.1
TRBV6-8A0A0A6YYG3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-8A0A0A6YYG3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-8A0A0A6YYG3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRBV6-8A0A0A6YYG3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-8A0A0A6YYG3 AC103834.1-201ENST00000520383 144 ntBASIC15.68■□□□□ 0.1
TRBV6-8A0A0A6YYG3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRBV6-8A0A0A6YYG3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-8A0A0A6YYG3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-8A0A0A6YYG3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRBV6-8A0A0A6YYG3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TRBV6-8A0A0A6YYG3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-8A0A0A6YYG3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-8A0A0A6YYG3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-8A0A0A6YYG3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.67■□□□□ 0.1
TRBV6-8A0A0A6YYG3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC15.67■□□□□ 0.1
TRBV6-8A0A0A6YYG3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-8A0A0A6YYG3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.67■□□□□ 0.1
TRBV6-8A0A0A6YYG3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-8A0A0A6YYG3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-8A0A0A6YYG3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-8A0A0A6YYG3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-8A0A0A6YYG3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-8A0A0A6YYG3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TRBV6-8A0A0A6YYG3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-8A0A0A6YYG3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-8A0A0A6YYG3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRBV6-8A0A0A6YYG3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 AC103724.3-201ENST00000564481 992 ntBASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.66■□□□□ 0.1
TRBV6-8A0A0A6YYG3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.65■□□□□ 0.1
TRBV6-8A0A0A6YYG3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-8A0A0A6YYG3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC15.65■□□□□ 0.1
TRBV6-8A0A0A6YYG3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-8A0A0A6YYG3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC15.65■□□□□ 0.1
TRBV6-8A0A0A6YYG3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC15.65■□□□□ 0.1
TRBV6-8A0A0A6YYG3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.65■□□□□ 0.1
TRBV6-8A0A0A6YYG3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-8A0A0A6YYG3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC15.65■□□□□ 0.1
TRBV6-8A0A0A6YYG3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRBV6-8A0A0A6YYG3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.64■□□□□ 0.1
TRBV6-8A0A0A6YYG3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TRBV6-8A0A0A6YYG3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRBV6-8A0A0A6YYG3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-8A0A0A6YYG3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TRBV6-8A0A0A6YYG3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-8A0A0A6YYG3 AL031848.2-201ENST00000607670 837 ntBASIC15.64■□□□□ 0.09
TRBV6-8A0A0A6YYG3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.64■□□□□ 0.09
TRBV6-8A0A0A6YYG3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-8A0A0A6YYG3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV6-8A0A0A6YYG3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV6-8A0A0A6YYG3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-8A0A0A6YYG3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV6-8A0A0A6YYG3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-8A0A0A6YYG3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-8A0A0A6YYG3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV6-8A0A0A6YYG3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms