Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
KCNIP3Q9Y2W7 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
KCNIP3Q9Y2W7 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 AL391069.4-201ENST00000609583 481 ntBASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 AC007431.3-201ENST00000623221 587 ntBASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 AC064801.2-201ENST00000625052 1303 ntBASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
KCNIP3Q9Y2W7 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 FAM95B1-212ENST00000592873 4692 ntBASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 AC007614.5-201ENST00000623424 8892 ntBASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 POLD2P1-201ENST00000511220 997 ntBASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.07□□□□□ -0.48
KCNIP3Q9Y2W7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms