Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC084262.1-201ENST00000567818 751 ntBASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 RN7SL480P-201ENST00000581481 294 ntBASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 LINC00528-201ENST00000600723 2160 ntBASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 LILRP2-202ENST00000413572 1383 ntBASIC17.11■□□□□ 0.33
ZC3H4Q9UPT8 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 CSHL1-201ENST00000259003 739 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 AIG1-203ENST00000367596 559 ntTSL 2 BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 HLA-DMA-202ENST00000395303 1007 ntBASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 CSHL1-206ENST00000450719 973 ntTSL 2 BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 TPT1P6-201ENST00000458298 514 ntBASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 AC092910.2-201ENST00000491262 348 ntBASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 RN7SL440P-201ENST00000577855 343 ntBASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 AP002414.2-201ENST00000591780 3365 ntBASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZC3H4Q9UPT8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 AC006504.5-208ENST00000588784 2401 ntBASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 MIR339-201ENST00000362153 94 ntBASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 HDGF-202ENST00000368206 960 ntTSL 5 BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 RPSAP12-201ENST00000435879 888 ntBASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 ISL1-203ENST00000511384 981 ntTSL 5 BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 ACY3-202ENST00000529256 933 ntTSL 3 BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.09■□□□□ 0.33
ZC3H4Q9UPT8 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZC3H4Q9UPT8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZC3H4Q9UPT8 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ZC3H4Q9UPT8 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ZC3H4Q9UPT8 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
ZC3H4Q9UPT8 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.08■□□□□ 0.33
ZC3H4Q9UPT8 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ZC3H4Q9UPT8 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZC3H4Q9UPT8 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZC3H4Q9UPT8 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ZC3H4Q9UPT8 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ZC3H4Q9UPT8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 SNRPCP15-201ENST00000424055 192 ntBASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC17.08■□□□□ 0.32
ZC3H4Q9UPT8 ZNF877P-201ENST00000437614 612 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms