Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC060766.1-201ENST00000590824 627 ntBASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 AP000346.4-201ENST00000614827 381 ntBASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 CU633904.3-201ENST00000624042 1029 ntBASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 AC092299.1-201ENST00000632679 757 ntBASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.95□□□□□ -0.18
CUEDC1Q9NWM3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 AC079781.5-202ENST00000641784 3743 ntBASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 ARL4AP4-201ENST00000434170 518 ntBASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 OR2R1P-201ENST00000441404 914 ntBASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 AL133466.1-201ENST00000447582 150 ntBASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 FTLP1-201ENST00000449155 526 ntBASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 HIST2H2BC-201ENST00000498492 580 ntBASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 AC106794.1-201ENST00000506935 792 ntBASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 AC005740.2-201ENST00000511085 419 ntBASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 AC124068.2-201ENST00000569473 1109 ntBASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 SNORD3B-2-202ENST00000571722 791 ntBASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 AL353726.2-201ENST00000623259 884 ntBASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CUEDC1Q9NWM3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 AL022313.4-201ENST00000562756 2046 ntBASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 SLC14A1-205ENST00000502059 2371 ntTSL 2 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 MIR769-201ENST00000390225 118 ntBASIC13.93□□□□□ -0.18
CUEDC1Q9NWM3 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms