Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 AC091046.1-201ENST00000331871 207 ntBASIC15.18■□□□□ 0.02
ATP2A3Q93084 AC239868.1-201ENST00000369385 493 ntBASIC15.18■□□□□ 0.02
ATP2A3Q93084 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 FXNP2-201ENST00000411625 547 ntBASIC15.18■□□□□ 0.02
ATP2A3Q93084 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 RTN3P1-201ENST00000536295 711 ntBASIC15.18■□□□□ 0.02
ATP2A3Q93084 PRKXP1-201ENST00000561423 1122 ntBASIC15.18■□□□□ 0.02
ATP2A3Q93084 AC103988.2-201ENST00000561804 725 ntBASIC15.18■□□□□ 0.02
ATP2A3Q93084 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 AC012044.1-201ENST00000603431 297 ntBASIC15.18■□□□□ 0.02
ATP2A3Q93084 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.18■□□□□ 0.02
ATP2A3Q93084 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ATP2A3Q93084 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.17■□□□□ 0.02
ATP2A3Q93084 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
ATP2A3Q93084 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ATP2A3Q93084 AC005840.4-201ENST00000541242 2494 ntBASIC15.17■□□□□ 0.02
ATP2A3Q93084 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.17■□□□□ 0.02
ATP2A3Q93084 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.17■□□□□ 0.02
ATP2A3Q93084 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 KRT8P21-201ENST00000430398 1491 ntBASIC15.17■□□□□ 0.02
ATP2A3Q93084 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC15.17■□□□□ 0.02
ATP2A3Q93084 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.17■□□□□ 0.02
ATP2A3Q93084 AL645933.1-201ENST00000440087 609 ntBASIC15.17■□□□□ 0.02
ATP2A3Q93084 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.17■□□□□ 0.02
ATP2A3Q93084 AC006122.1-201ENST00000493323 440 ntBASIC15.17■□□□□ 0.02
ATP2A3Q93084 AC116345.2-201ENST00000512837 523 ntBASIC15.17■□□□□ 0.02
ATP2A3Q93084 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.17■□□□□ 0.02
ATP2A3Q93084 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.17■□□□□ 0.02
ATP2A3Q93084 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
ATP2A3Q93084 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ATP2A3Q93084 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
ATP2A3Q93084 AC152010.1-201ENST00000415779 2006 ntBASIC15.17■□□□□ 0.02
ATP2A3Q93084 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.17■□□□□ 0.02
ATP2A3Q93084 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC15.17■□□□□ 0.02
ATP2A3Q93084 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 AL359881.3-201ENST00000602640 1721 ntBASIC15.17■□□□□ 0.02
ATP2A3Q93084 AC041040.2-201ENST00000622926 2899 ntBASIC15.17■□□□□ 0.02
ATP2A3Q93084 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
ATP2A3Q93084 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms