Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 NOS2P3-201ENST00000411468 867 ntBASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 NOS2P2-201ENST00000426269 867 ntBASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC9.24□□□□□ -0.93
ALMS1Q8TCU4 MGST3-204ENST00000367888 778 ntTSL 3 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 RBMXP1-201ENST00000408004 1191 ntBASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AC009132.1-201ENST00000565194 320 ntBASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AL109954.1-202ENST00000564051 2148 ntBASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AL157832.2-205ENST00000597245 1649 ntBASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AC018529.2-202ENST00000611482 3087 ntBASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 FTLP3-201ENST00000427242 528 ntBASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 NAA10-205ENST00000393712 908 ntTSL 5 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 MKL1-204ENST00000402630 747 ntTSL 2 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 HNRNPA1P73-201ENST00000446472 928 ntBASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AC015818.1-201ENST00000451011 244 ntBASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AC067942.1-202ENST00000471756 1057 ntBASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 AC069061.4-201ENST00000581294 1347 ntBASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
ALMS1Q8TCU4 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms