Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.3□□□□□ -0.28
H3F3CQ6NXT2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 MIR33B-201ENST00000385104 96 ntBASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 AL592076.1-201ENST00000424448 303 ntBASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 AC022447.6-201ENST00000515522 438 ntBASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 KRT8P1-201ENST00000557533 1207 ntBASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 MIR4722-201ENST00000578292 60 ntBASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 MIR4706-201ENST00000582134 82 ntBASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 CAP2P1-201ENST00000557743 1390 ntBASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H3F3CQ6NXT2 AC138969.2-201ENST00000532739 9932 ntBASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H3F3CQ6NXT2 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms