Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 AL157407.1-201ENST00000435784 904 ntBASIC13.82□□□□□ -0.2
RFTN2Q52LD8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 CNN2P10-201ENST00000443067 918 ntBASIC13.82□□□□□ -0.2
RFTN2Q52LD8 HIST2H2BB-201ENST00000449108 381 ntBASIC13.82□□□□□ -0.2
RFTN2Q52LD8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 DUX4L46-201ENST00000566845 751 ntBASIC13.82□□□□□ -0.2
RFTN2Q52LD8 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RFTN2Q52LD8 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 MIR497HG-202ENST00000572453 3838 ntBASIC13.81□□□□□ -0.2
RFTN2Q52LD8 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 COL6A4P2-202ENST00000504443 2753 ntBASIC13.81□□□□□ -0.2
RFTN2Q52LD8 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 HMGN1P19-201ENST00000436976 333 ntBASIC13.81□□□□□ -0.2
RFTN2Q52LD8 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 CU639417.3-201ENST00000624240 1404 ntBASIC13.81□□□□□ -0.2
RFTN2Q52LD8 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RFTN2Q52LD8 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RFTN2Q52LD8 LAP3P2-201ENST00000454686 1454 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms