Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.06■□□□□ 0
IRX4P78413 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
IRX4P78413 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
IRX4P78413 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.06■□□□□ 0
IRX4P78413 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC15.06■□□□□ 0
IRX4P78413 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
IRX4P78413 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
IRX4P78413 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.05■□□□□ 0
IRX4P78413 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.05■□□□□ 0
IRX4P78413 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
IRX4P78413 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.05■□□□□ 0
IRX4P78413 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.05■□□□□ 0
IRX4P78413 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
IRX4P78413 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
IRX4P78413 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.05■□□□□ 0
IRX4P78413 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
IRX4P78413 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.05■□□□□ 0
IRX4P78413 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
IRX4P78413 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
IRX4P78413 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.05■□□□□ 0
IRX4P78413 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IRX4P78413 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
IRX4P78413 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
IRX4P78413 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.05■□□□□ -0
IRX4P78413 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
IRX4P78413 AL139094.1-201ENST00000405549 1188 ntBASIC15.05■□□□□ -0
IRX4P78413 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC15.05■□□□□ -0
IRX4P78413 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.05■□□□□ -0
IRX4P78413 AC021723.1-201ENST00000486306 515 ntBASIC15.05■□□□□ -0
IRX4P78413 NUP210P1-202ENST00000504322 710 ntBASIC15.05■□□□□ -0
IRX4P78413 AC100850.1-201ENST00000506768 649 ntBASIC15.05■□□□□ -0
IRX4P78413 AC024681.1-201ENST00000521917 487 ntBASIC15.05■□□□□ -0
IRX4P78413 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.05■□□□□ -0
IRX4P78413 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC15.05■□□□□ -0
IRX4P78413 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
IRX4P78413 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.05■□□□□ -0
IRX4P78413 AL645939.5-201ENST00000606834 243 ntBASIC15.05■□□□□ -0
IRX4P78413 ZACNP1-201ENST00000612259 710 ntBASIC15.05■□□□□ -0
IRX4P78413 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
IRX4P78413 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
IRX4P78413 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.05■□□□□ -0
IRX4P78413 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
IRX4P78413 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.05■□□□□ -0
IRX4P78413 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
IRX4P78413 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.05■□□□□ -0
IRX4P78413 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IRX4P78413 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.05■□□□□ -0
IRX4P78413 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
IRX4P78413 AC092135.3-201ENST00000624151 1846 ntBASIC15.05■□□□□ -0
IRX4P78413 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IRX4P78413 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IRX4P78413 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IRX4P78413 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.05■□□□□ -0
IRX4P78413 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.05■□□□□ -0
IRX4P78413 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
IRX4P78413 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IRX4P78413 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IRX4P78413 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IRX4P78413 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.05■□□□□ -0
IRX4P78413 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IRX4P78413 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
IRX4P78413 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.04■□□□□ -0
IRX4P78413 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC15.04■□□□□ -0
IRX4P78413 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.04■□□□□ -0
IRX4P78413 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.04■□□□□ -0
IRX4P78413 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.04■□□□□ -0
IRX4P78413 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.04■□□□□ -0
IRX4P78413 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.04■□□□□ -0
IRX4P78413 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.04■□□□□ -0
IRX4P78413 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.04■□□□□ -0
IRX4P78413 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.04■□□□□ -0
IRX4P78413 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.04■□□□□ -0
IRX4P78413 AC006480.2-201ENST00000609770 1337 ntBASIC15.04■□□□□ -0
IRX4P78413 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.04■□□□□ -0
IRX4P78413 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.04■□□□□ -0
IRX4P78413 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.04■□□□□ -0
IRX4P78413 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
IRX4P78413 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC15.04■□□□□ -0
IRX4P78413 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.04■□□□□ -0
IRX4P78413 AC012618.1-201ENST00000461223 412 ntBASIC15.04■□□□□ -0
IRX4P78413 AC008267.1-201ENST00000474858 1069 ntBASIC15.04■□□□□ -0
IRX4P78413 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.04■□□□□ -0
IRX4P78413 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms