Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC007663.3-201ENST00000609632 465 ntBASIC13.56□□□□□ -0.24
RAE1P78406 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.56□□□□□ -0.24
RAE1P78406 AC004923.1-202ENST00000642106 209 ntBASIC13.56□□□□□ -0.24
RAE1P78406 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
RAE1P78406 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.56□□□□□ -0.24
RAE1P78406 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RAE1P78406 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.56□□□□□ -0.24
RAE1P78406 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RAE1P78406 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 AC005252.3-201ENST00000623855 2258 ntBASIC13.56□□□□□ -0.24
RAE1P78406 AC068760.1-201ENST00000493579 1953 ntBASIC13.56□□□□□ -0.24
RAE1P78406 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RAE1P78406 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.56□□□□□ -0.24
RAE1P78406 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
RAE1P78406 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.55□□□□□ -0.24
RAE1P78406 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RAE1P78406 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.55□□□□□ -0.24
RAE1P78406 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.55□□□□□ -0.24
RAE1P78406 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.55□□□□□ -0.24
RAE1P78406 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RAE1P78406 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
RAE1P78406 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.55□□□□□ -0.24
RAE1P78406 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.55□□□□□ -0.24
RAE1P78406 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 OR8S1-201ENST00000310194 1080 ntBASIC13.55□□□□□ -0.24
RAE1P78406 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.55□□□□□ -0.24
RAE1P78406 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.55□□□□□ -0.24
RAE1P78406 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.55□□□□□ -0.24
RAE1P78406 AC078875.1-201ENST00000431907 724 ntBASIC13.55□□□□□ -0.24
RAE1P78406 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.55□□□□□ -0.24
RAE1P78406 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.55□□□□□ -0.24
RAE1P78406 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.55□□□□□ -0.24
RAE1P78406 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.55□□□□□ -0.24
RAE1P78406 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RAE1P78406 AC104982.3-201ENST00000581995 514 ntBASIC13.55□□□□□ -0.24
RAE1P78406 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
RAE1P78406 AC090164.2-201ENST00000611487 516 ntBASIC13.55□□□□□ -0.24
RAE1P78406 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 CR392039.2-201ENST00000623182 509 ntBASIC13.55□□□□□ -0.24
RAE1P78406 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.55□□□□□ -0.24
RAE1P78406 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.55□□□□□ -0.24
RAE1P78406 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
RAE1P78406 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 AL590824.1-201ENST00000403828 1349 ntBASIC13.55□□□□□ -0.24
RAE1P78406 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.55□□□□□ -0.24
RAE1P78406 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.55□□□□□ -0.24
RAE1P78406 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RAE1P78406 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RAE1P78406 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RAE1P78406 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RAE1P78406 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
RAE1P78406 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
RAE1P78406 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
RAE1P78406 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
RAE1P78406 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.54□□□□□ -0.24
RAE1P78406 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
RAE1P78406 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RAE1P78406 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.54□□□□□ -0.24
RAE1P78406 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms