Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VSX2P58304 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
VSX2P58304 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
VSX2P58304 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
VSX2P58304 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VSX2P58304 AL662890.1-201ENST00000396818 632 ntBASIC13.77□□□□□ -0.21
VSX2P58304 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VSX2P58304 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.77□□□□□ -0.21
VSX2P58304 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.77□□□□□ -0.21
VSX2P58304 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
VSX2P58304 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
VSX2P58304 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
VSX2P58304 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VSX2P58304 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.77□□□□□ -0.21
VSX2P58304 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VSX2P58304 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.77□□□□□ -0.21
VSX2P58304 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.77□□□□□ -0.21
VSX2P58304 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
VSX2P58304 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.77□□□□□ -0.21
VSX2P58304 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VSX2P58304 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
VSX2P58304 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VSX2P58304 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
VSX2P58304 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
VSX2P58304 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VSX2P58304 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
VSX2P58304 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VSX2P58304 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
VSX2P58304 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VSX2P58304 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
VSX2P58304 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.77□□□□□ -0.21
VSX2P58304 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
VSX2P58304 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
VSX2P58304 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.76□□□□□ -0.21
VSX2P58304 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.76□□□□□ -0.21
VSX2P58304 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VSX2P58304 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VSX2P58304 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.76□□□□□ -0.21
VSX2P58304 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
VSX2P58304 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.76□□□□□ -0.21
VSX2P58304 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
VSX2P58304 AP002353.1-201ENST00000528257 1599 ntBASIC13.76□□□□□ -0.21
VSX2P58304 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.76□□□□□ -0.21
VSX2P58304 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.76□□□□□ -0.21
VSX2P58304 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.76□□□□□ -0.21
VSX2P58304 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VSX2P58304 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.76□□□□□ -0.21
VSX2P58304 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
VSX2P58304 FRMPD2B-201ENST00000431305 1347 ntBASIC13.76□□□□□ -0.21
VSX2P58304 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
VSX2P58304 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.76□□□□□ -0.21
VSX2P58304 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.76□□□□□ -0.21
VSX2P58304 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.76□□□□□ -0.21
VSX2P58304 AL161670.2-201ENST00000557650 1227 ntBASIC13.76□□□□□ -0.21
VSX2P58304 AC140658.4-201ENST00000561990 352 ntBASIC13.76□□□□□ -0.21
VSX2P58304 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.76□□□□□ -0.21
VSX2P58304 MIR3619-201ENST00000579667 83 ntBASIC13.76□□□□□ -0.21
VSX2P58304 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.76□□□□□ -0.21
VSX2P58304 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.76□□□□□ -0.21
VSX2P58304 AC104506.1-201ENST00000609247 429 ntBASIC13.76□□□□□ -0.21
VSX2P58304 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC13.76□□□□□ -0.21
VSX2P58304 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.76□□□□□ -0.21
VSX2P58304 SNX12-206ENST00000622259 661 ntTSL 5 BASIC13.76□□□□□ -0.21
VSX2P58304 AC090386.2-201ENST00000623010 1039 ntBASIC13.76□□□□□ -0.21
VSX2P58304 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.76□□□□□ -0.21
VSX2P58304 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.76□□□□□ -0.21
VSX2P58304 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
VSX2P58304 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.76□□□□□ -0.21
VSX2P58304 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
VSX2P58304 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
VSX2P58304 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.76□□□□□ -0.21
VSX2P58304 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
VSX2P58304 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
VSX2P58304 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
VSX2P58304 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
VSX2P58304 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms