Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.94□□□□□ -0.34
SUMO3P55854 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SUMO3P55854 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
SUMO3P55854 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SUMO3P55854 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SUMO3P55854 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.94□□□□□ -0.34
SUMO3P55854 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
SUMO3P55854 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SUMO3P55854 AC061965.1-201ENST00000560524 1465 ntBASIC12.94□□□□□ -0.34
SUMO3P55854 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.94□□□□□ -0.34
SUMO3P55854 RPS9P1-201ENST00000419943 583 ntBASIC12.94□□□□□ -0.34
SUMO3P55854 ISCA2P1-201ENST00000425548 448 ntBASIC12.94□□□□□ -0.34
SUMO3P55854 AC006335.1-201ENST00000445200 547 ntBASIC12.94□□□□□ -0.34
SUMO3P55854 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.94□□□□□ -0.34
SUMO3P55854 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.94□□□□□ -0.34
SUMO3P55854 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.94□□□□□ -0.34
SUMO3P55854 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
SUMO3P55854 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.94□□□□□ -0.34
SUMO3P55854 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.94□□□□□ -0.34
SUMO3P55854 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.94□□□□□ -0.34
SUMO3P55854 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
SUMO3P55854 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SUMO3P55854 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.94□□□□□ -0.34
SUMO3P55854 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.94□□□□□ -0.34
SUMO3P55854 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.94□□□□□ -0.34
SUMO3P55854 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
SUMO3P55854 AL139158.3-201ENST00000641212 1562 ntBASIC12.94□□□□□ -0.34
SUMO3P55854 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.94□□□□□ -0.34
SUMO3P55854 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SUMO3P55854 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SUMO3P55854 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SUMO3P55854 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SUMO3P55854 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SUMO3P55854 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.93□□□□□ -0.34
SUMO3P55854 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.93□□□□□ -0.34
SUMO3P55854 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.93□□□□□ -0.34
SUMO3P55854 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.93□□□□□ -0.34
SUMO3P55854 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
SUMO3P55854 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.93□□□□□ -0.34
SUMO3P55854 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 AC006987.1-201ENST00000413610 527 ntBASIC12.93□□□□□ -0.34
SUMO3P55854 CYP46A4P-201ENST00000414953 267 ntBASIC12.93□□□□□ -0.34
SUMO3P55854 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.93□□□□□ -0.34
SUMO3P55854 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.93□□□□□ -0.34
SUMO3P55854 FNTAP2-201ENST00000430308 634 ntBASIC12.93□□□□□ -0.34
SUMO3P55854 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 CALR4P-201ENST00000431943 946 ntBASIC12.93□□□□□ -0.34
SUMO3P55854 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.93□□□□□ -0.34
SUMO3P55854 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.93□□□□□ -0.34
SUMO3P55854 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SUMO3P55854 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms