Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
GSK3AP49840 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GSK3AP49840 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.62□□□□□ -0.39
GSK3AP49840 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
GSK3AP49840 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
GSK3AP49840 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
GSK3AP49840 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
GSK3AP49840 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.62□□□□□ -0.39
GSK3AP49840 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.62□□□□□ -0.39
GSK3AP49840 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.62□□□□□ -0.39
GSK3AP49840 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.62□□□□□ -0.39
GSK3AP49840 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
GSK3AP49840 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.62□□□□□ -0.39
GSK3AP49840 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.62□□□□□ -0.39
GSK3AP49840 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
GSK3AP49840 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.62□□□□□ -0.39
GSK3AP49840 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.62□□□□□ -0.39
GSK3AP49840 AC112492.5-201ENST00000421897 457 ntBASIC12.62□□□□□ -0.39
GSK3AP49840 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 AL355994.2-201ENST00000447882 704 ntBASIC12.62□□□□□ -0.39
GSK3AP49840 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 COX20P2-201ENST00000452636 358 ntBASIC12.62□□□□□ -0.39
GSK3AP49840 CROCCP4-201ENST00000457096 498 ntBASIC12.62□□□□□ -0.39
GSK3AP49840 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.62□□□□□ -0.39
GSK3AP49840 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
GSK3AP49840 AP000812.2-201ENST00000538934 718 ntBASIC12.62□□□□□ -0.39
GSK3AP49840 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.62□□□□□ -0.39
GSK3AP49840 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.62□□□□□ -0.39
GSK3AP49840 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC12.62□□□□□ -0.39
GSK3AP49840 PPY2P-201ENST00000582808 702 ntBASIC12.62□□□□□ -0.39
GSK3AP49840 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.62□□□□□ -0.39
GSK3AP49840 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.62□□□□□ -0.39
GSK3AP49840 AL136301.1-201ENST00000615830 422 ntBASIC12.62□□□□□ -0.39
GSK3AP49840 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.62□□□□□ -0.39
GSK3AP49840 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
GSK3AP49840 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.62□□□□□ -0.39
GSK3AP49840 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
GSK3AP49840 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
GSK3AP49840 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.62□□□□□ -0.39
GSK3AP49840 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
GSK3AP49840 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.62□□□□□ -0.39
GSK3AP49840 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
GSK3AP49840 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.62□□□□□ -0.39
GSK3AP49840 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.62□□□□□ -0.39
GSK3AP49840 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
GSK3AP49840 PDIA3P1-201ENST00000471856 1510 ntBASIC12.62□□□□□ -0.39
GSK3AP49840 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.62□□□□□ -0.39
GSK3AP49840 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.62□□□□□ -0.39
GSK3AP49840 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GSK3AP49840 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GSK3AP49840 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GSK3AP49840 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.61□□□□□ -0.39
GSK3AP49840 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GSK3AP49840 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GSK3AP49840 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GSK3AP49840 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GSK3AP49840 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.61□□□□□ -0.39
GSK3AP49840 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
GSK3AP49840 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
GSK3AP49840 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GSK3AP49840 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GSK3AP49840 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
GSK3AP49840 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
GSK3AP49840 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GSK3AP49840 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.61□□□□□ -0.39
GSK3AP49840 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
GSK3AP49840 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.61□□□□□ -0.39
GSK3AP49840 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GSK3AP49840 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GSK3AP49840 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
GSK3AP49840 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GSK3AP49840 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
GSK3AP49840 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
GSK3AP49840 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
GSK3AP49840 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms