Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 C12orf74-202ENST00000544406 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 EPB41L1-205ENST00000373946 6327 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 MPI-208ENST00000563786 1707 ntTSL 5 BASIC9.23□□□□□ -0.93
PCP4P48539 PRAMEF8-203ENST00000621519 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC9.23□□□□□ -0.93
PCP4P48539 ARMT1-204ENST00000545879 2495 ntTSL 2 BASIC9.23□□□□□ -0.93
PCP4P48539 ZNF264-201ENST00000263095 12163 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
PCP4P48539 MYLK-205ENST00000360772 10027 ntAPPRIS P3 TSL 5 BASIC9.23□□□□□ -0.93
PCP4P48539 OPCML-201ENST00000331898 6833 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 AC006030.1-201ENST00000451608 5059 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
PCP4P48539 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 TAF5L-203ENST00000366675 4062 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 PDGFD-202ENST00000393158 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 SAPCD2P1-201ENST00000395413 1184 ntBASIC9.23□□□□□ -0.93
PCP4P48539 AC092669.1-202ENST00000449673 905 ntTSL 3 BASIC9.23□□□□□ -0.93
PCP4P48539 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
PCP4P48539 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC9.23□□□□□ -0.93
PCP4P48539 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC9.23□□□□□ -0.93
PCP4P48539 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC9.23□□□□□ -0.93
PCP4P48539 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC9.23□□□□□ -0.93
PCP4P48539 USP11-201ENST00000218348 3338 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 DEF8-229ENST00000617948 3883 ntAPPRIS P4 TSL 5 BASIC9.23□□□□□ -0.93
PCP4P48539 SCML4-202ENST00000369021 2056 ntTSL 5 BASIC9.23□□□□□ -0.93
PCP4P48539 SERPINA5-203ENST00000553780 2071 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
PCP4P48539 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC9.23□□□□□ -0.93
PCP4P48539 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
PCP4P48539 AC018521.7-201ENST00000580282 2927 ntBASIC9.23□□□□□ -0.93
PCP4P48539 NOP2-201ENST00000322166 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 BTAF1-201ENST00000265990 7250 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 AC100827.4-201ENST00000563464 2441 ntBASIC9.23□□□□□ -0.93
PCP4P48539 TJAP1-215ENST00000612912 4312 ntTSL 2 BASIC9.23□□□□□ -0.93
PCP4P48539 C1GALT1C1-201ENST00000304661 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 ICOSLG-204ENST00000407780 7080 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 AL136295.1-201ENST00000530611 2740 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
PCP4P48539 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 EXD2-204ENST00000409242 2496 ntTSL 2 BASIC9.23□□□□□ -0.93
PCP4P48539 AC008676.1-201ENST00000508443 1932 ntTSL 5 BASIC9.23□□□□□ -0.93
PCP4P48539 SNTG1-202ENST00000518864 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 ERCC3-201ENST00000285398 2750 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
PCP4P48539 MYO18A-223ENST00000628822 7501 ntAPPRIS ALT1 TSL 5 BASIC9.23□□□□□ -0.93
PCP4P48539 MIR124-2HG-203ENST00000521441 2840 ntTSL 2 BASIC9.23□□□□□ -0.93
PCP4P48539 ADAM32-203ENST00000437682 2281 ntTSL 2 BASIC9.22□□□□□ -0.93
PCP4P48539 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC9.22□□□□□ -0.93
PCP4P48539 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
PCP4P48539 FRMD7-201ENST00000298542 3198 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 MMP3-201ENST00000299855 2016 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 PPP1R26P3-201ENST00000612861 3800 ntBASIC9.22□□□□□ -0.93
PCP4P48539 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
PCP4P48539 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC9.22□□□□□ -0.93
PCP4P48539 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 CLEC4M-203ENST00000334806 1781 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
PCP4P48539 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC9.22□□□□□ -0.93
PCP4P48539 STXBP1-220ENST00000637521 2068 ntTSL 5 BASIC9.22□□□□□ -0.93
PCP4P48539 LILRB2-201ENST00000314446 2397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 MCMDC2-202ENST00000396592 2373 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 PLA2G2D-201ENST00000375105 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 PPP6R3-204ENST00000393801 5069 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 KIR3DX1-205ENST00000610811 3325 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
PCP4P48539 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 ECHDC1-209ENST00000454591 1515 ntTSL 2 BASIC9.22□□□□□ -0.93
PCP4P48539 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 ARHGEF9-202ENST00000374870 4644 ntTSL 5 BASIC9.22□□□□□ -0.93
PCP4P48539 EML1-202ENST00000327921 3715 ntTSL 2 BASIC9.22□□□□□ -0.93
PCP4P48539 CDK14-202ENST00000380050 4995 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC9.22□□□□□ -0.93
PCP4P48539 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 ASS1-201ENST00000352480 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC9.22□□□□□ -0.93
PCP4P48539 SSR4P1-201ENST00000415143 412 ntBASIC9.22□□□□□ -0.93
PCP4P48539 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC9.22□□□□□ -0.93
PCP4P48539 AP001462.1-201ENST00000594089 452 ntBASIC9.22□□□□□ -0.93
PCP4P48539 SLC16A1-AS1-207ENST00000627431 1073 ntTSL 5 BASIC9.22□□□□□ -0.93
PCP4P48539 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC9.22□□□□□ -0.93
PCP4P48539 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC9.22□□□□□ -0.93
PCP4P48539 FLJ37035-202ENST00000423178 2600 ntTSL 2 BASIC9.22□□□□□ -0.93
PCP4P48539 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 FCHO2-202ENST00000430046 4981 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 C3orf20-201ENST00000253697 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 SEMA4A-204ENST00000368285 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 TACC2-202ENST00000334433 9377 ntTSL 5 BASIC9.22□□□□□ -0.93
PCP4P48539 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC9.22□□□□□ -0.93
PCP4P48539 AC079779.1-201ENST00000437798 4775 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 TRPM3-202ENST00000357533 5145 ntTSL 5 BASIC9.22□□□□□ -0.93
PCP4P48539 AGAP11-201ENST00000433214 3078 ntTSL 2 BASIC9.22□□□□□ -0.93
PCP4P48539 ARHGEF15-202ENST00000421050 4138 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 GRIK1-204ENST00000399907 3472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 MRS2-201ENST00000274747 3821 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
PCP4P48539 DPF2-201ENST00000252268 2462 ntTSL 5 BASIC9.22□□□□□ -0.93
PCP4P48539 AKAP13-221ENST00000560579 4290 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
PCP4P48539 LCA5-203ENST00000467898 2894 ntTSL 5 BASIC9.22□□□□□ -0.93
PCP4P48539 C5orf66-AS2-201ENST00000505663 2162 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
PCP4P48539 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms