Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 DFFBP1-201ENST00000433250 979 ntBASIC12.7□□□□□ -0.38
SOX2P48431 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.7□□□□□ -0.38
SOX2P48431 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
SOX2P48431 AC022137.2-201ENST00000503482 481 ntBASIC12.7□□□□□ -0.38
SOX2P48431 FTLP10-202ENST00000505798 471 ntBASIC12.7□□□□□ -0.38
SOX2P48431 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.7□□□□□ -0.38
SOX2P48431 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.7□□□□□ -0.38
SOX2P48431 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.7□□□□□ -0.38
SOX2P48431 AC027237.1-201ENST00000560942 655 ntBASIC12.7□□□□□ -0.38
SOX2P48431 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.7□□□□□ -0.38
SOX2P48431 ENPP7P14-201ENST00000621765 1040 ntBASIC12.7□□□□□ -0.38
SOX2P48431 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.7□□□□□ -0.38
SOX2P48431 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
SOX2P48431 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
SOX2P48431 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.7□□□□□ -0.38
SOX2P48431 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
SOX2P48431 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 TNRC18P1-201ENST00000502875 3650 ntBASIC12.7□□□□□ -0.38
SOX2P48431 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.7□□□□□ -0.38
SOX2P48431 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.7□□□□□ -0.38
SOX2P48431 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
SOX2P48431 AGAP12P-201ENST00000585227 2359 ntBASIC12.7□□□□□ -0.38
SOX2P48431 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
SOX2P48431 CSPG4P11-201ENST00000560634 4910 ntBASIC12.7□□□□□ -0.38
SOX2P48431 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.69□□□□□ -0.38
SOX2P48431 KRT8P28-201ENST00000433288 1390 ntBASIC12.69□□□□□ -0.38
SOX2P48431 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.69□□□□□ -0.38
SOX2P48431 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SOX2P48431 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SOX2P48431 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.69□□□□□ -0.38
SOX2P48431 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SOX2P48431 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.69□□□□□ -0.38
SOX2P48431 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.69□□□□□ -0.38
SOX2P48431 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
SOX2P48431 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
SOX2P48431 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.69□□□□□ -0.38
SOX2P48431 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SOX2P48431 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
SOX2P48431 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.69□□□□□ -0.38
SOX2P48431 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.69□□□□□ -0.38
SOX2P48431 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 AC005586.2-201ENST00000563946 837 ntBASIC12.69□□□□□ -0.38
SOX2P48431 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.69□□□□□ -0.38
SOX2P48431 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.69□□□□□ -0.38
SOX2P48431 AC005498.2-205ENST00000593218 784 ntBASIC12.69□□□□□ -0.38
SOX2P48431 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.69□□□□□ -0.38
SOX2P48431 AL132655.2-201ENST00000596276 594 ntBASIC12.69□□□□□ -0.38
SOX2P48431 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.69□□□□□ -0.38
SOX2P48431 CHCHD2P3-201ENST00000603038 451 ntBASIC12.69□□□□□ -0.38
SOX2P48431 AC145423.3-201ENST00000615987 467 ntBASIC12.69□□□□□ -0.38
SOX2P48431 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
SOX2P48431 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
SOX2P48431 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 AC007541.1-201ENST00000570282 1469 ntBASIC12.69□□□□□ -0.38
SOX2P48431 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SOX2P48431 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.69□□□□□ -0.38
SOX2P48431 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.69□□□□□ -0.38
SOX2P48431 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
SOX2P48431 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.69□□□□□ -0.38
SOX2P48431 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.69□□□□□ -0.38
SOX2P48431 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
SOX2P48431 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
SOX2P48431 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
SOX2P48431 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms