Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ATRXP46100 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATRXP46100 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC12.92□□□□□ -0.34
ATRXP46100 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATRXP46100 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.92□□□□□ -0.34
ATRXP46100 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
ATRXP46100 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATRXP46100 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATRXP46100 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.92□□□□□ -0.34
ATRXP46100 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATRXP46100 OR7E12P-201ENST00000344740 973 ntBASIC12.92□□□□□ -0.34
ATRXP46100 IQCF4-203ENST00000428561 420 ntBASIC12.92□□□□□ -0.34
ATRXP46100 AC093627.3-201ENST00000467050 574 ntTSL 4 BASIC12.92□□□□□ -0.34
ATRXP46100 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC12.92□□□□□ -0.34
ATRXP46100 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
ATRXP46100 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATRXP46100 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ATRXP46100 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATRXP46100 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
ATRXP46100 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC12.92□□□□□ -0.34
ATRXP46100 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.92□□□□□ -0.34
ATRXP46100 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.92□□□□□ -0.34
ATRXP46100 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATRXP46100 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC12.92□□□□□ -0.34
ATRXP46100 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATRXP46100 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ATRXP46100 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.92□□□□□ -0.34
ATRXP46100 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
ATRXP46100 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.92□□□□□ -0.34
ATRXP46100 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
ATRXP46100 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATRXP46100 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.92□□□□□ -0.34
ATRXP46100 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATRXP46100 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATRXP46100 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
ATRXP46100 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
ATRXP46100 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
ATRXP46100 AC007679.1-201ENST00000458609 502 ntBASIC12.91□□□□□ -0.34
ATRXP46100 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.91□□□□□ -0.34
ATRXP46100 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.91□□□□□ -0.34
ATRXP46100 NDUFB10P1-201ENST00000567319 521 ntBASIC12.91□□□□□ -0.34
ATRXP46100 Z69706.1-201ENST00000595428 547 ntBASIC12.91□□□□□ -0.34
ATRXP46100 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.91□□□□□ -0.34
ATRXP46100 AC080128.2-201ENST00000641520 11863 ntBASIC12.91□□□□□ -0.34
ATRXP46100 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.91□□□□□ -0.34
ATRXP46100 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
ATRXP46100 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.91□□□□□ -0.34
ATRXP46100 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ATRXP46100 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
ATRXP46100 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 IGHV3-11-201ENST00000390601 473 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
ATRXP46100 GAPDHP65-201ENST00000425487 1006 ntBASIC12.91□□□□□ -0.34
ATRXP46100 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC12.91□□□□□ -0.34
ATRXP46100 RPSAP70-201ENST00000504462 864 ntBASIC12.91□□□□□ -0.34
ATRXP46100 DSCAS-201ENST00000581836 553 ntTSL 4 BASIC12.91□□□□□ -0.34
ATRXP46100 RN7SL556P-201ENST00000582856 298 ntBASIC12.91□□□□□ -0.34
ATRXP46100 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ATRXP46100 AL136982.5-201ENST00000605222 294 ntBASIC12.91□□□□□ -0.34
ATRXP46100 URAHP-205ENST00000610227 398 ntBASIC12.91□□□□□ -0.34
ATRXP46100 AC139100.2-201ENST00000616901 662 ntBASIC12.91□□□□□ -0.34
ATRXP46100 COG6-212ENST00000630730 186 ntTSL 5 BASIC12.91□□□□□ -0.34
ATRXP46100 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
ATRXP46100 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.91□□□□□ -0.34
ATRXP46100 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
ATRXP46100 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.91□□□□□ -0.34
ATRXP46100 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.91□□□□□ -0.34
ATRXP46100 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
ATRXP46100 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.91□□□□□ -0.34
ATRXP46100 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
ATRXP46100 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC12.9□□□□□ -0.34
ATRXP46100 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
ATRXP46100 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
ATRXP46100 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
ATRXP46100 OR7E115P-201ENST00000382617 1024 ntBASIC12.9□□□□□ -0.34
ATRXP46100 MRPL23-203ENST00000397294 551 ntTSL 4 BASIC12.9□□□□□ -0.34
ATRXP46100 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms