Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 FAM86MP-201ENST00000340703 885 ntBASIC12.97□□□□□ -0.33
APOBEC1P41238 RN7SKP214-201ENST00000364208 315 ntBASIC12.97□□□□□ -0.33
APOBEC1P41238 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
APOBEC1P41238 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.97□□□□□ -0.33
APOBEC1P41238 AL008707.1-201ENST00000422498 534 ntBASIC12.97□□□□□ -0.33
APOBEC1P41238 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.97□□□□□ -0.33
APOBEC1P41238 TSPY25P-201ENST00000429463 745 ntBASIC12.97□□□□□ -0.33
APOBEC1P41238 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.97□□□□□ -0.33
APOBEC1P41238 AC011742.3-201ENST00000439053 820 ntBASIC12.97□□□□□ -0.33
APOBEC1P41238 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 TMEM198B-204ENST00000484016 896 ntBASIC12.97□□□□□ -0.33
APOBEC1P41238 AC091804.1-201ENST00000486888 567 ntBASIC12.97□□□□□ -0.33
APOBEC1P41238 RCC2P8-201ENST00000502779 1035 ntBASIC12.97□□□□□ -0.33
APOBEC1P41238 AC092658.1-201ENST00000505836 891 ntBASIC12.97□□□□□ -0.33
APOBEC1P41238 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
APOBEC1P41238 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.97□□□□□ -0.33
APOBEC1P41238 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.97□□□□□ -0.33
APOBEC1P41238 MIR6869-201ENST00000619434 62 ntBASIC12.97□□□□□ -0.33
APOBEC1P41238 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
APOBEC1P41238 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.97□□□□□ -0.33
APOBEC1P41238 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.97□□□□□ -0.33
APOBEC1P41238 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.97□□□□□ -0.33
APOBEC1P41238 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.97□□□□□ -0.33
APOBEC1P41238 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.97□□□□□ -0.33
APOBEC1P41238 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
APOBEC1P41238 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
APOBEC1P41238 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
APOBEC1P41238 AL157996.1-201ENST00000624684 2299 ntBASIC12.96□□□□□ -0.33
APOBEC1P41238 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 SHMT1P1-201ENST00000419974 1312 ntBASIC12.96□□□□□ -0.33
APOBEC1P41238 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
APOBEC1P41238 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
APOBEC1P41238 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC12.96□□□□□ -0.33
APOBEC1P41238 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
APOBEC1P41238 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.96□□□□□ -0.33
APOBEC1P41238 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.96□□□□□ -0.33
APOBEC1P41238 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC12.96□□□□□ -0.33
APOBEC1P41238 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 AL451050.2-201ENST00000606967 682 ntBASIC12.96□□□□□ -0.33
APOBEC1P41238 AL157813.1-201ENST00000612996 587 ntBASIC12.96□□□□□ -0.33
APOBEC1P41238 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.96□□□□□ -0.33
APOBEC1P41238 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
APOBEC1P41238 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
APOBEC1P41238 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.96□□□□□ -0.33
APOBEC1P41238 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOBEC1P41238 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.96□□□□□ -0.34
APOBEC1P41238 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOBEC1P41238 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOBEC1P41238 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
APOBEC1P41238 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
APOBEC1P41238 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.96□□□□□ -0.34
APOBEC1P41238 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.96□□□□□ -0.34
APOBEC1P41238 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
APOBEC1P41238 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.95□□□□□ -0.34
APOBEC1P41238 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms