Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.23□□□□□ -0.13
HMGCLP35914 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 BEND3P1-201ENST00000421591 1944 ntBASIC14.23□□□□□ -0.13
HMGCLP35914 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGCLP35914 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGCLP35914 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
HMGCLP35914 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.23□□□□□ -0.13
HMGCLP35914 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.23□□□□□ -0.13
HMGCLP35914 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGCLP35914 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGCLP35914 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HMGCLP35914 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 CYP46A4P-201ENST00000414953 267 ntBASIC14.23□□□□□ -0.13
HMGCLP35914 ACTG1P2-201ENST00000415776 1125 ntBASIC14.23□□□□□ -0.13
HMGCLP35914 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.23□□□□□ -0.13
HMGCLP35914 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.23□□□□□ -0.13
HMGCLP35914 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 ACTG1P11-201ENST00000425411 1125 ntBASIC14.23□□□□□ -0.13
HMGCLP35914 AC006335.1-201ENST00000445200 547 ntBASIC14.23□□□□□ -0.13
HMGCLP35914 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.23□□□□□ -0.13
HMGCLP35914 GOLGA2P8-201ENST00000505201 779 ntBASIC14.23□□□□□ -0.13
HMGCLP35914 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.23□□□□□ -0.13
HMGCLP35914 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.23□□□□□ -0.13
HMGCLP35914 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGCLP35914 KRT8P1-201ENST00000557533 1207 ntBASIC14.23□□□□□ -0.13
HMGCLP35914 AL161670.2-201ENST00000557650 1227 ntBASIC14.23□□□□□ -0.13
HMGCLP35914 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.23□□□□□ -0.13
HMGCLP35914 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.23□□□□□ -0.13
HMGCLP35914 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
HMGCLP35914 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.23□□□□□ -0.13
HMGCLP35914 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.23□□□□□ -0.13
HMGCLP35914 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.23□□□□□ -0.13
HMGCLP35914 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.23□□□□□ -0.13
HMGCLP35914 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HMGCLP35914 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
HMGCLP35914 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HMGCLP35914 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HMGCLP35914 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGCLP35914 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 AC015909.3-201ENST00000572855 1794 ntBASIC14.22□□□□□ -0.13
HMGCLP35914 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 AC041040.2-201ENST00000622926 2899 ntBASIC14.22□□□□□ -0.13
HMGCLP35914 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGCLP35914 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.22□□□□□ -0.13
HMGCLP35914 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGCLP35914 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGCLP35914 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGCLP35914 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.22□□□□□ -0.13
HMGCLP35914 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
HMGCLP35914 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.22□□□□□ -0.13
HMGCLP35914 MEG3_2.1-201ENST00000611456 105 ntBASIC14.22□□□□□ -0.13
HMGCLP35914 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HMGCLP35914 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
HMGCLP35914 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
HMGCLP35914 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGCLP35914 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HMGCLP35914 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
HMGCLP35914 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC14.22□□□□□ -0.13
HMGCLP35914 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HMGCLP35914 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HMGCLP35914 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HMGCLP35914 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HMGCLP35914 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGCLP35914 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.21□□□□□ -0.13
HMGCLP35914 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.21□□□□□ -0.13
HMGCLP35914 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms