Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC18.86■□□□□ 0.61
USP6P35125 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC18.86■□□□□ 0.61
USP6P35125 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 FAM187B2P-201ENST00000577135 713 ntBASIC18.86■□□□□ 0.61
USP6P35125 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
USP6P35125 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC18.86■□□□□ 0.61
USP6P35125 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC18.86■□□□□ 0.61
USP6P35125 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.86■□□□□ 0.61
USP6P35125 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
USP6P35125 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
USP6P35125 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
USP6P35125 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP6P35125 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP6P35125 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP6P35125 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
USP6P35125 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP6P35125 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP6P35125 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC18.85■□□□□ 0.61
USP6P35125 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP6P35125 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP6P35125 IFNWP2-201ENST00000431203 580 ntBASIC18.85■□□□□ 0.61
USP6P35125 AC007279.1-201ENST00000448547 837 ntBASIC18.85■□□□□ 0.61
USP6P35125 VDAC1P11-201ENST00000458323 852 ntBASIC18.85■□□□□ 0.61
USP6P35125 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC18.85■□□□□ 0.61
USP6P35125 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC18.85■□□□□ 0.61
USP6P35125 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP6P35125 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC18.85■□□□□ 0.61
USP6P35125 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC18.85■□□□□ 0.61
USP6P35125 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC18.85■□□□□ 0.61
USP6P35125 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC18.85■□□□□ 0.61
USP6P35125 AC010531.8-201ENST00000623341 685 ntBASIC18.85■□□□□ 0.61
USP6P35125 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP6P35125 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP6P35125 HSPA7-201ENST00000445535 1927 ntBASIC18.85■□□□□ 0.61
USP6P35125 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USP6P35125 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC18.85■□□□□ 0.61
USP6P35125 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP6P35125 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.85■□□□□ 0.61
USP6P35125 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
USP6P35125 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP6P35125 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC18.85■□□□□ 0.61
USP6P35125 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP6P35125 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP6P35125 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.85■□□□□ 0.61
USP6P35125 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP6P35125 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP6P35125 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
USP6P35125 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USP6P35125 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
USP6P35125 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP6P35125 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP6P35125 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP6P35125 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP6P35125 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
USP6P35125 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC18.84■□□□□ 0.61
USP6P35125 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC18.84■□□□□ 0.61
USP6P35125 AC041040.1-201ENST00000425197 460 ntBASIC18.84■□□□□ 0.61
USP6P35125 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC18.84■□□□□ 0.61
USP6P35125 TBC1D3P6-201ENST00000505954 962 ntBASIC18.84■□□□□ 0.61
USP6P35125 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC18.84■□□□□ 0.61
USP6P35125 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC18.84■□□□□ 0.61
USP6P35125 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP6P35125 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC18.84■□□□□ 0.61
USP6P35125 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC18.84■□□□□ 0.61
USP6P35125 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC18.84■□□□□ 0.61
USP6P35125 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.84■□□□□ 0.61
USP6P35125 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP6P35125 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP6P35125 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP6P35125 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC18.84■□□□□ 0.61
USP6P35125 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.84■□□□□ 0.61
USP6P35125 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
USP6P35125 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
USP6P35125 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP6P35125 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP6P35125 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP6P35125 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP6P35125 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP6P35125 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP6P35125 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP6P35125 TUBB4AP1-201ENST00000450755 1325 ntBASIC18.84■□□□□ 0.61
USP6P35125 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC18.84■□□□□ 0.61
USP6P35125 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USP6P35125 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP6P35125 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC18.84■□□□□ 0.61
USP6P35125 AL513477.1-201ENST00000602865 2407 ntBASIC18.84■□□□□ 0.61
USP6P35125 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
USP6P35125 FMO6P-201ENST00000236166 1620 ntBASIC18.84■□□□□ 0.61
USP6P35125 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms