Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB3BP20337 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB3BP20337 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB3BP20337 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB3BP20337 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RAB3BP20337 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RAB3BP20337 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB3BP20337 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB3BP20337 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB3BP20337 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 AC092580.3-201ENST00000430932 139 ntBASIC12.63□□□□□ -0.39
RAB3BP20337 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB3BP20337 PUDPP3-201ENST00000445368 636 ntBASIC12.63□□□□□ -0.39
RAB3BP20337 HLA-J-203ENST00000494367 1087 ntBASIC12.63□□□□□ -0.39
RAB3BP20337 ALG3P1-201ENST00000508806 1114 ntBASIC12.63□□□□□ -0.39
RAB3BP20337 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.63□□□□□ -0.39
RAB3BP20337 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.63□□□□□ -0.39
RAB3BP20337 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.63□□□□□ -0.39
RAB3BP20337 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
RAB3BP20337 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RAB3BP20337 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
RAB3BP20337 AL390955.2-201ENST00000603032 514 ntBASIC12.63□□□□□ -0.39
RAB3BP20337 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB3BP20337 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB3BP20337 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
RAB3BP20337 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB3BP20337 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 AC020910.5-201ENST00000623668 1865 ntBASIC12.63□□□□□ -0.39
RAB3BP20337 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.63□□□□□ -0.39
RAB3BP20337 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
RAB3BP20337 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
RAB3BP20337 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.63□□□□□ -0.39
RAB3BP20337 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
RAB3BP20337 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB3BP20337 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB3BP20337 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
RAB3BP20337 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RAB3BP20337 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB3BP20337 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
RAB3BP20337 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.62□□□□□ -0.39
RAB3BP20337 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
RAB3BP20337 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB3BP20337 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB3BP20337 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
RAB3BP20337 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB3BP20337 AC211486.1-202ENST00000416371 468 ntBASIC12.62□□□□□ -0.39
RAB3BP20337 AC254562.1-201ENST00000417586 456 ntBASIC12.62□□□□□ -0.39
RAB3BP20337 AC107890.1-201ENST00000422478 521 ntBASIC12.62□□□□□ -0.39
RAB3BP20337 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB3BP20337 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.62□□□□□ -0.39
RAB3BP20337 AC009477.1-201ENST00000452936 217 ntBASIC12.62□□□□□ -0.39
RAB3BP20337 AC211476.1-201ENST00000503899 468 ntBASIC12.62□□□□□ -0.39
RAB3BP20337 AC109322.1-201ENST00000524499 1264 ntBASIC12.62□□□□□ -0.39
RAB3BP20337 AC135586.1-201ENST00000539323 574 ntBASIC12.62□□□□□ -0.39
RAB3BP20337 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.62□□□□□ -0.39
RAB3BP20337 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.62□□□□□ -0.39
RAB3BP20337 AL158211.3-201ENST00000607385 239 ntBASIC12.62□□□□□ -0.39
RAB3BP20337 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB3BP20337 AP005019.2-201ENST00000615104 511 ntBASIC12.62□□□□□ -0.39
RAB3BP20337 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.62□□□□□ -0.39
RAB3BP20337 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
RAB3BP20337 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms