Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ERCC3P19447 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ERCC3P19447 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
ERCC3P19447 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
ERCC3P19447 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
ERCC3P19447 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ERCC3P19447 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.64■□□□□ 0.25
ERCC3P19447 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ERCC3P19447 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
ERCC3P19447 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
ERCC3P19447 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 Z69890.1-201ENST00000382990 339 ntBASIC16.64■□□□□ 0.25
ERCC3P19447 ST13P19-201ENST00000442505 1124 ntBASIC16.64■□□□□ 0.25
ERCC3P19447 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.64■□□□□ 0.25
ERCC3P19447 RPL18AP3-201ENST00000462885 528 ntBASIC16.64■□□□□ 0.25
ERCC3P19447 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.64■□□□□ 0.25
ERCC3P19447 MRPL22P1-201ENST00000505398 616 ntBASIC16.64■□□□□ 0.25
ERCC3P19447 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.64■□□□□ 0.25
ERCC3P19447 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.64■□□□□ 0.25
ERCC3P19447 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.64■□□□□ 0.25
ERCC3P19447 AC084781.1-201ENST00000613737 656 ntBASIC16.64■□□□□ 0.25
ERCC3P19447 AC009084.3-201ENST00000623356 437 ntBASIC16.64■□□□□ 0.25
ERCC3P19447 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.64■□□□□ 0.25
ERCC3P19447 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 AC018442.1-201ENST00000421439 2061 ntBASIC16.64■□□□□ 0.25
ERCC3P19447 AP001267.2-201ENST00000532619 2086 ntBASIC16.64■□□□□ 0.25
ERCC3P19447 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.64■□□□□ 0.25
ERCC3P19447 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ERCC3P19447 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
ERCC3P19447 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.64■□□□□ 0.25
ERCC3P19447 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.64■□□□□ 0.25
ERCC3P19447 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ERCC3P19447 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ERCC3P19447 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ERCC3P19447 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.63■□□□□ 0.25
ERCC3P19447 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.63■□□□□ 0.25
ERCC3P19447 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ERCC3P19447 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC16.63■□□□□ 0.25
ERCC3P19447 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 KRT17P5-201ENST00000332088 839 ntBASIC16.63■□□□□ 0.25
ERCC3P19447 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ERCC3P19447 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.63■□□□□ 0.25
ERCC3P19447 CTBP2P4-201ENST00000513884 920 ntBASIC16.63■□□□□ 0.25
ERCC3P19447 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 AC025262.2-201ENST00000623975 1056 ntBASIC16.63■□□□□ 0.25
ERCC3P19447 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.63■□□□□ 0.25
ERCC3P19447 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.63■□□□□ 0.25
ERCC3P19447 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ERCC3P19447 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
ERCC3P19447 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ERCC3P19447 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.63■□□□□ 0.25
ERCC3P19447 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ERCC3P19447 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.63■□□□□ 0.25
ERCC3P19447 USP31-203ENST00000567975 2142 ntTSL 2 BASIC16.63■□□□□ 0.25
ERCC3P19447 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.63■□□□□ 0.25
ERCC3P19447 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.62■□□□□ 0.25
ERCC3P19447 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms