Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VCLP18206 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VCLP18206 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.52□□□□□ -0.08
VCLP18206 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VCLP18206 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VCLP18206 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VCLP18206 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VCLP18206 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
VCLP18206 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.52□□□□□ -0.09
VCLP18206 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.52□□□□□ -0.09
VCLP18206 AC104306.2-201ENST00000451877 341 ntBASIC14.52□□□□□ -0.09
VCLP18206 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VCLP18206 TUBB8P8-201ENST00000458717 1058 ntBASIC14.52□□□□□ -0.09
VCLP18206 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VCLP18206 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VCLP18206 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VCLP18206 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.52□□□□□ -0.09
VCLP18206 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VCLP18206 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.52□□□□□ -0.09
VCLP18206 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VCLP18206 AC007663.3-201ENST00000609632 465 ntBASIC14.52□□□□□ -0.09
VCLP18206 MIR6869-201ENST00000619434 62 ntBASIC14.52□□□□□ -0.09
VCLP18206 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.52□□□□□ -0.09
VCLP18206 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
VCLP18206 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
VCLP18206 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VCLP18206 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
VCLP18206 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
VCLP18206 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VCLP18206 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VCLP18206 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
VCLP18206 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.51□□□□□ -0.09
VCLP18206 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
VCLP18206 MYADML-201ENST00000474610 2147 ntBASIC14.51□□□□□ -0.09
VCLP18206 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.51□□□□□ -0.09
VCLP18206 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
VCLP18206 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.51□□□□□ -0.09
VCLP18206 KRT8P29-201ENST00000420409 1371 ntBASIC14.51□□□□□ -0.09
VCLP18206 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.51□□□□□ -0.09
VCLP18206 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VCLP18206 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.51□□□□□ -0.09
VCLP18206 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.51□□□□□ -0.09
VCLP18206 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.51□□□□□ -0.09
VCLP18206 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.51□□□□□ -0.09
VCLP18206 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.51□□□□□ -0.09
VCLP18206 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.51□□□□□ -0.09
VCLP18206 AC108725.1-201ENST00000495472 409 ntBASIC14.51□□□□□ -0.09
VCLP18206 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.51□□□□□ -0.09
VCLP18206 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
VCLP18206 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.51□□□□□ -0.09
VCLP18206 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.51□□□□□ -0.09
VCLP18206 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.51□□□□□ -0.09
VCLP18206 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.51□□□□□ -0.09
VCLP18206 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.51□□□□□ -0.09
VCLP18206 AC243960.2-201ENST00000600996 747 ntBASIC14.51□□□□□ -0.09
VCLP18206 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
VCLP18206 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.51□□□□□ -0.09
VCLP18206 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.51□□□□□ -0.09
VCLP18206 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.51□□□□□ -0.09
VCLP18206 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.51□□□□□ -0.09
VCLP18206 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.51□□□□□ -0.09
VCLP18206 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
VCLP18206 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.51□□□□□ -0.09
VCLP18206 AC015688.4-201ENST00000580780 1647 ntBASIC14.51□□□□□ -0.09
VCLP18206 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.51□□□□□ -0.09
VCLP18206 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VCLP18206 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.5□□□□□ -0.09
VCLP18206 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.5□□□□□ -0.09
VCLP18206 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
VCLP18206 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VCLP18206 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.5□□□□□ -0.09
VCLP18206 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.5□□□□□ -0.09
VCLP18206 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VCLP18206 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.5□□□□□ -0.09
VCLP18206 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms