Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM228BP0C875 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM228BP0C875 TSN-212ENST00000536142 3328 ntTSL 2 BASIC15.3■□□□□ 0.04
FAM228BP0C875 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM228BP0C875 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
FAM228BP0C875 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM228BP0C875 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC15.3■□□□□ 0.04
FAM228BP0C875 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FAM228BP0C875 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC15.29■□□□□ 0.04
FAM228BP0C875 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC15.29■□□□□ 0.04
FAM228BP0C875 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
FAM228BP0C875 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.29■□□□□ 0.04
FAM228BP0C875 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.29■□□□□ 0.04
FAM228BP0C875 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 AL023775.1-201ENST00000454907 1746 ntBASIC15.29■□□□□ 0.04
FAM228BP0C875 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
FAM228BP0C875 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.29■□□□□ 0.04
FAM228BP0C875 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
FAM228BP0C875 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
FAM228BP0C875 AC007952.5-201ENST00000572818 1486 ntBASIC15.29■□□□□ 0.04
FAM228BP0C875 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
FAM228BP0C875 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.29■□□□□ 0.04
FAM228BP0C875 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.29■□□□□ 0.04
FAM228BP0C875 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.29■□□□□ 0.04
FAM228BP0C875 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.29■□□□□ 0.04
FAM228BP0C875 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 KRT43P-201ENST00000434019 910 ntBASIC15.29■□□□□ 0.04
FAM228BP0C875 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.29■□□□□ 0.04
FAM228BP0C875 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.29■□□□□ 0.04
FAM228BP0C875 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
FAM228BP0C875 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.29■□□□□ 0.04
FAM228BP0C875 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
FAM228BP0C875 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.29■□□□□ 0.04
FAM228BP0C875 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
FAM228BP0C875 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.29■□□□□ 0.04
FAM228BP0C875 AC090386.2-201ENST00000623010 1039 ntBASIC15.29■□□□□ 0.04
FAM228BP0C875 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
FAM228BP0C875 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.29■□□□□ 0.04
FAM228BP0C875 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
FAM228BP0C875 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC15.29■□□□□ 0.04
FAM228BP0C875 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.29■□□□□ 0.04
FAM228BP0C875 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC15.29■□□□□ 0.04
FAM228BP0C875 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FAM228BP0C875 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC15.29■□□□□ 0.04
FAM228BP0C875 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.29■□□□□ 0.04
FAM228BP0C875 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC15.29■□□□□ 0.04
FAM228BP0C875 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM228BP0C875 CYP4F23P-201ENST00000593402 1579 ntBASIC15.28■□□□□ 0.04
FAM228BP0C875 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
FAM228BP0C875 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
FAM228BP0C875 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
FAM228BP0C875 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
FAM228BP0C875 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM228BP0C875 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
FAM228BP0C875 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.28■□□□□ 0.04
FAM228BP0C875 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 AL391647.1-201ENST00000395664 511 ntBASIC15.28■□□□□ 0.04
FAM228BP0C875 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FAM228BP0C875 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.28■□□□□ 0.04
FAM228BP0C875 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.28■□□□□ 0.04
FAM228BP0C875 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM228BP0C875 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.28■□□□□ 0.04
FAM228BP0C875 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.28■□□□□ 0.04
FAM228BP0C875 AC022217.1-201ENST00000521069 738 ntBASIC15.28■□□□□ 0.04
FAM228BP0C875 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.28■□□□□ 0.04
FAM228BP0C875 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
FAM228BP0C875 AC003686.1-201ENST00000550956 1034 ntBASIC15.28■□□□□ 0.04
FAM228BP0C875 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.28■□□□□ 0.04
FAM228BP0C875 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.28■□□□□ 0.04
FAM228BP0C875 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms