Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
OPN1SWP03999 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
OPN1SWP03999 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
OPN1SWP03999 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
OPN1SWP03999 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
OPN1SWP03999 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
OPN1SWP03999 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
OPN1SWP03999 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.45□□□□□ -0.26
OPN1SWP03999 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
OPN1SWP03999 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC13.45□□□□□ -0.26
OPN1SWP03999 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.45□□□□□ -0.26
OPN1SWP03999 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
OPN1SWP03999 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
OPN1SWP03999 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.45□□□□□ -0.26
OPN1SWP03999 C2orf27AP3-201ENST00000434123 579 ntBASIC13.45□□□□□ -0.26
OPN1SWP03999 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.45□□□□□ -0.26
OPN1SWP03999 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.45□□□□□ -0.26
OPN1SWP03999 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
OPN1SWP03999 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.45□□□□□ -0.26
OPN1SWP03999 AC073413.1-201ENST00000603927 732 ntBASIC13.45□□□□□ -0.26
OPN1SWP03999 AL358472.3-201ENST00000608147 415 ntBASIC13.45□□□□□ -0.26
OPN1SWP03999 AC244669.2-201ENST00000612320 853 ntBASIC13.45□□□□□ -0.26
OPN1SWP03999 AL354718.3-201ENST00000616414 581 ntBASIC13.45□□□□□ -0.26
OPN1SWP03999 AC027601.3-201ENST00000622907 509 ntBASIC13.45□□□□□ -0.26
OPN1SWP03999 CR382287.1-201ENST00000623954 586 ntBASIC13.45□□□□□ -0.26
OPN1SWP03999 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 AC114271.1-201ENST00000612689 2813 ntBASIC13.45□□□□□ -0.26
OPN1SWP03999 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.45□□□□□ -0.26
OPN1SWP03999 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
OPN1SWP03999 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.45□□□□□ -0.26
OPN1SWP03999 PCDHA6-201ENST00000378126 3267 ntBASIC13.45□□□□□ -0.26
OPN1SWP03999 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.45□□□□□ -0.26
OPN1SWP03999 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
OPN1SWP03999 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
OPN1SWP03999 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
OPN1SWP03999 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
OPN1SWP03999 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
OPN1SWP03999 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
OPN1SWP03999 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
OPN1SWP03999 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.44□□□□□ -0.26
OPN1SWP03999 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.44□□□□□ -0.26
OPN1SWP03999 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
OPN1SWP03999 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.44□□□□□ -0.26
OPN1SWP03999 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.44□□□□□ -0.26
OPN1SWP03999 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.44□□□□□ -0.26
OPN1SWP03999 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.44□□□□□ -0.26
OPN1SWP03999 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
OPN1SWP03999 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.44□□□□□ -0.26
OPN1SWP03999 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
OPN1SWP03999 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
OPN1SWP03999 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
OPN1SWP03999 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
OPN1SWP03999 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.44□□□□□ -0.26
OPN1SWP03999 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.44□□□□□ -0.26
OPN1SWP03999 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
OPN1SWP03999 FTH1P14-201ENST00000482930 551 ntBASIC13.44□□□□□ -0.26
OPN1SWP03999 COX5BP1-201ENST00000507622 393 ntBASIC13.44□□□□□ -0.26
OPN1SWP03999 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.44□□□□□ -0.26
OPN1SWP03999 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.44□□□□□ -0.26
OPN1SWP03999 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.44□□□□□ -0.26
OPN1SWP03999 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
OPN1SWP03999 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
OPN1SWP03999 AC078819.1-201ENST00000547454 765 ntBASIC13.44□□□□□ -0.26
OPN1SWP03999 AC012085.1-201ENST00000548270 765 ntBASIC13.44□□□□□ -0.26
OPN1SWP03999 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
OPN1SWP03999 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
OPN1SWP03999 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.44□□□□□ -0.26
OPN1SWP03999 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
OPN1SWP03999 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
OPN1SWP03999 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms