Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 TPO-206ENST00000382269 1155 ntTSL 5 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 PGF-202ENST00000405431 666 ntTSL 5 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 AC010141.1-201ENST00000411585 623 ntBASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 AC079178.1-201ENST00000420915 656 ntBASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 YBX1P6-201ENST00000442962 1002 ntBASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 HIST2H2BB-201ENST00000449108 381 ntBASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 AP006547.1-201ENST00000563435 692 ntBASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 AP005482.1-201ENST00000563722 1273 ntBASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 AC027601.3-201ENST00000622907 509 ntBASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 AC215219.1-201ENST00000400706 1817 ntBASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HLA-DRB4X5D2U9 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.67
HLA-DRB4X5D2U9 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
HLA-DRB4X5D2U9 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC10.9□□□□□ -0.67
HLA-DRB4X5D2U9 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC10.9□□□□□ -0.67
HLA-DRB4X5D2U9 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
HLA-DRB4X5D2U9 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
HLA-DRB4X5D2U9 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
HLA-DRB4X5D2U9 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.67
HLA-DRB4X5D2U9 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC10.9□□□□□ -0.67
HLA-DRB4X5D2U9 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 WARS-203ENST00000358655 2466 ntTSL 2 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 ANKRD19P-201ENST00000338192 862 ntBASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 MIR326-201ENST00000362220 95 ntBASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC10.89□□□□□ -0.67
HLA-DRB4X5D2U9 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms