Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC104784.1-201ENST00000473096 294 ntBASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 RN7SL81P-201ENST00000493781 261 ntBASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 AC138701.2-201ENST00000553634 226 ntBASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTDP1Q9Y5B0 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CTDP1Q9Y5B0 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CTDP1Q9Y5B0 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CTDP1Q9Y5B0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.58■□□□□ 0.25
CTDP1Q9Y5B0 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CTDP1Q9Y5B0 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.25
CTDP1Q9Y5B0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CTDP1Q9Y5B0 MTHFR-210ENST00000641407 2387 ntBASIC16.58■□□□□ 0.25
CTDP1Q9Y5B0 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CTDP1Q9Y5B0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CTDP1Q9Y5B0 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CTDP1Q9Y5B0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CTDP1Q9Y5B0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 AL161932.2-201ENST00000435436 679 ntBASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 MIR4750-201ENST00000584564 56 ntBASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 AC138894.2-201ENST00000602838 371 ntBASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 FGD5P1-202ENST00000614866 2498 ntBASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 CICP14-201ENST00000629111 2732 ntBASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTDP1Q9Y5B0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 AC092978.1-202ENST00000637590 1327 ntBASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 RPSAP31-201ENST00000416648 895 ntBASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.57■□□□□ 0.24
CTDP1Q9Y5B0 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms