Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATP6V0A4Q9HBG4 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ATP6V0A4Q9HBG4 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
ATP6V0A4Q9HBG4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.98■□□□□ 0.15
ATP6V0A4Q9HBG4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
ATP6V0A4Q9HBG4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
ATP6V0A4Q9HBG4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 CR383656.2-201ENST00000548656 2254 ntBASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 TBC1D3J-201ENST00000620719 1426 ntBASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 AC019193.1-201ENST00000506678 823 ntBASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 MIR6727-201ENST00000620702 65 ntBASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ATP6V0A4Q9HBG4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 CFL1-214ENST00000534769 758 ntTSL 2 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 U62317.3-201ENST00000608319 855 ntBASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 AL022334.2-201ENST00000610000 484 ntBASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 MEG3_2.1-201ENST00000611456 105 ntBASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 MIR7845-201ENST00000618396 99 ntBASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 AC012617.1-204ENST00000586340 2305 ntBASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ATP6V0A4Q9HBG4 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms